Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium606g00007 ATGGCGGCTTCCGATGGAAGCGAATACTTCGAATTAGGATCACTCCATAGCGAGAGCTTCGCTATGGCCTCCAACTCCGAGACCGTGGCCGAGGATGAAGAGGAGCTGCAGTGGGCGGCGCTCTCCAGGTTGCCGTCGCAGAAGCGCATCAACTACGCCCTCCTCCGCGCATCTTCTTCCCGTGCTCAACCTCCTACGCAAGACTTAGTTGACGTCCGAAAGCTGAGCCGCTCTCGCCGGGAACTCGTCGTTAAGAAAGCTCTGGCCACCACCGACCAAGACAACTACCGCCTTCTCTGCGCCATAAAAGAACGCTTCGACAGGGTTGGGTTGGAGGTGCCGAAGATCGAGGTGAGATTCAGGAACCTGAACGTCTCTGCCAATGTTCAAATTGGTTCTAGAGCTCTACCAACACTGGTTAACTATACTCGTGATTGCTTCGAGGGAATCCTAACTAAGATGAGGTTATGCAAACCTAAACGGCATGCCCTTACCATACTGAACAATATCAGTGGCGTTATCAAGCCAGGAAGGATGACTCTGCTATTAGGACCTCCGGGAGCAGGTAAAACCAGCTTACTTCTGGCTCTCGCGGGCAAGCTTGATAACAACCTCAAGACAACGGGTAGTATAACATACAATGGCTGCGAGGTGGACGATTTTTATGTTCGACGGACTTCTGCATACATTAGCCAAACAGATGATCACGTTGCGGAACTGACGGTAAGAGAATGTTTGGATTTTGGTGCTAGATGTCAAGGTGCAGAAGAAGGTTTTGCAGCATATACAACCGAACTTGGCCGCCTAGAGAAGGAAAGGAACATAAGACCTAGTGCAGAAGTTGACGCGTTTATGAAGGCATCATCTGTCGGAGGTAAGAAACACAGCGTGAATACGGATTACATTTTGAAAGTGCTTGGTCTCGATATATGTTCGGAGACAATAGTTGGCAACGATATGATGCGAGGGGTTTCTGGGGGCCAAAAGAAAAGAGTTACAACAGGAGAGATGATTGTTGGTCCAAGAAAAACACTATTTATGGATGAGATATCAACTGGTCTTGATAGCTCCACTACGTTCCAGATAGTAAAATGCATAAAGAACTTTGTTCATCAAATGGACGCTACAGTACTCATGGCTCTCCTTCAGCCAGCTCCTGAGACATTTGAGCTATTTGATGATCTGGTGCTTCTGTCAGAAGGGTACGTGGTATATCAAGGTCCTCGAGAAGACGTGCTCGACTTTTTTCAGTCATTAGGTTTTCAACTTCCACCTCGTAAGGGGATTGCTGACTTTCTACAGGAGGTGACATCTAAAAAGGATCAAGCACAATACTGGGCAGACCCTTCAAAACCATATGTGTTCGTCTCAGTTGCTGAAATTGCACAAGCCTTTAAAAATTCGAAATTTGGAAAGTATATGGAATCCTTGCAAAGTCATCCACTTGATACATCAAAAGGTCATCCTTCAGCTTTGGCTAGAACTAAATATGCCGTGCCAAGATGGGATCTTGCCAAAGCTTGTTTTTCTCGAGAACTCCTCTTGATAAGAAGGCATAGCTTTCTTTATATCTTTAGGACCTGCCAGGTTGCTTTTGTTGGATTTGTCACATGTACAGTATTCCTACGAACAAGGTTACATCCCACAGATGAGGTTTATGGACGCCTTTATCTTTCTGCTCTATTTTTTGGGATGGTTCACATGATGTTTAATGGATTTTCTGAGCTACCACTCTTGATAAGTCGGCTTCCAGTATTTTATAAACAAAGAGATAATTTGTTCTATCCTGCATGGGCGTGGTCTGTTACCAGTTGGGTTCTACGTGTACCCTATTCCGTTGTTGAGGCTGTTATATGGACTGTTGTTGTATATTACAGTGTTGGATTTGCTCCATCAGCAGGAAGGTTTTTTCGCTACATGCTTTTACTTTTTTTAATGCATCAAATGGCATTAGGTCTCTTCCGTATGATGGCAGCTGTTGCACGTGATATGGTTCTTGCCAACACATATGGATCAGCTTCACTACTTATTGTATTCTTACTAGGAGGATTTATTATACCTAAAGCAATGATTAAACCGTGGTGGATTTGGGGCTACTGGTTGTCCCCCCTTACCTATGGACAACGTGCTATCACAGTTAATGAATTTACTGCTACAAGATGGATGAAGAAATCCGAGAATGGGGGGAGCACAGTTGGTTACAATGTCCTAGTCTCACAGAGCCTACCAACTGCTGACTACTGGTACTGGATTGGTATTTCAGTTGTACTTGTCTATTCGCTTTTTTTCAACAACATGGTCACTGTGGCCTTGACCTTTCTGAATCCCCCACAAAAAGCACGAACAGTTATTCCAAGTGACGATGACTCGGAAAAGAAATCTTCAAGAGACGGCAGTAATCATGTCTATGAAACGAGTCCCCGCGCCAAATCTGCGAGAGAGGACAGTAATAAGAAAGGAATGATTCTTCCATTTCAACCACTGACAATGACATTCCATAATGTGAATTATTTTGTTGATATGCCAAAGGAGATAAGCAAGCAAGGAATACCTGAAACGCGGTTGCAGCTGTTGACAAACGTGAGCGGTGTTTTCTCACCCGGTGTACTTACAGCGTTAGTGGGCTCAAGTGGGGCTGGAAAGACCACTTTGATGGACGTACTGGCTGGTAGGAAAACTGGAGGCTACATAGAAGGGGAGATTAAAATTTCGGGTTACCCAAAAGAGCAACGAACATTTGCCAGAGTATCAGGATATGTTGAGCAAAATGATATTCATTCTCCTCAAGTAACAATTGAGGAGTCACTATTGTTTTCTTCAGCTCTTCGCCTTCCCAAGGAAGTTGGAGTTGCTAAAAGACTTGAGTTTGTTGAACAAGTGATGAAACTAGTTGAGCTTGATGCTTTGAGAAATGCTTTGGTTGGTATGCCAGGTAGTTCTGGCTTATCAACTGAGCAGAGAAAGCGATTAACAATAGCAGTGGAGCTTGTGGCAAACCCTTCCATTATTTTTATGGATGAGCCTACTTCTGGACTTGATGCACGTGCAGCAGCTATTGTTATGCGAGCTGTTCGAAATACTGTTGATACTGGTAGAACTGTAGTTTGCACCATACATCAACCAAGTATTGATATATTTGAAGCATTTGATGATTTACTTCTTATGAAACGTGGCGGACGAGTAATATATGGGGGGAAACTGGGTGTTCAGTCACAGATAATGATTGATTACTTTCAGGGAATAAAAGGAATTCCCCCCATTCCGAATGGGTACAATCCGGCCACCTGGGTGCTTGAGGTTACTACGCCTGCTACTGAAGAGAAACTTAATATAGATTTTGCAGAAGCTTACAAGAATTCGGATCAATACAGGGGGGTGGAGTCTTCTATCTTGCAATTTGGGCATCCTCCTGCAGGATCTGAACCACTGAAATTTGATTCTATGTATTCGCTAAATCTGTTTTCCCAATTTTTACGATGCCTATGGAAACAAAATCTTGTATACTGGAGAAGTCCATCGTATAATGCGATGAGGTTATACTTCACCACAATAAGTGCTCTGATATTTGGTACCGTATTTTGGGATGTTGGCTCAAAAAGGGAATCAACTCAAGAGCTGTTCGTGGTTATGGGAGCTATGTATTCTGCATGCATGTTTCTTGGGGTAAATAACTCTTCTTCTGTACAGCCAATTGTTTCAATAGAAAGGACTGTGTTCTATAGAGAGAAAGCTGCTGGTATGTACTCTCCAATAGCTTATGCTGCAGCCCAGGGGCTAATAGAGGTACCATACATCGCTGTTCAGACGATAGTATTCGGTATAATCACATATTTCATGATCAATTTTGAAAGGACAGCAGCAAAGTTTTTTCTCTATCTGGTGTTCATGTTCCTAACGTTCACCTACTTCACCTTTTACGGCATGATGGCCGTTGGTCTTACACCTTCCCAGCATCTAGCAGCTGTTATTTCTTCAGCATTTTACTCCCTGTGGAATCTTCTCTCAGGTTTTCTCATCCCAAAATCGAGTATTCCCGGGTGGTGGATTTGGTTCTATTATATCTGCCCGATTGCATGGACGTTACGTGGTATTATAACGTCTCAGCTTGGTGATGTGGAAACCATTATAGTGGGACCTGGATTCCAGGGCAGCGTGAAAGAGTATTTAGCTGTTACTCTTGGATATGACTCTAAAATCAACGGATTTTCAGCAGTGGGCCTTTCCGCCCTTGTGCTTATTGGATTTATCATTCTCTTCTTTGGTTCTTTCGCTGTATCAGTCAAAGTCTTGAATTTCCAAAAGAGATAA 4308 0.4355 MAASDGSEYFELGSLHSESFAMASNSETVAEDEEELQWAALSRLPSQKRINYALLRASSSRAQPPTQDLVDVRKLSRSRRELVVKKALATTDQDNYRLLCAIKERFDRVGLEVPKIEVRFRNLNVSANVQIGSRALPTLVNYTRDCFEGILTKMRLCKPKRHALTILNNISGVIKPGRMTLLLGPPGAGKTSLLLALAGKLDNNLKTTGSITYNGCEVDDFYVRRTSAYISQTDDHVAELTVRECLDFGARCQGAEEGFAAYTTELGRLEKERNIRPSAEVDAFMKASSVGGKKHSVNTDYILKVLGLDICSETIVGNDMMRGVSGGQKKRVTTGEMIVGPRKTLFMDEISTGLDSSTTFQIVKCIKNFVHQMDATVLMALLQPAPETFELFDDLVLLSEGYVVYQGPREDVLDFFQSLGFQLPPRKGIADFLQEVTSKKDQAQYWADPSKPYVFVSVAEIAQAFKNSKFGKYMESLQSHPLDTSKGHPSALARTKYAVPRWDLAKACFSRELLLIRRHSFLYIFRTCQVAFVGFVTCTVFLRTRLHPTDEVYGRLYLSALFFGMVHMMFNGFSELPLLISRLPVFYKQRDNLFYPAWAWSVTSWVLRVPYSVVEAVIWTVVVYYSVGFAPSAGRFFRYMLLLFLMHQMALGLFRMMAAVARDMVLANTYGSASLLIVFLLGGFIIPKAMIKPWWIWGYWLSPLTYGQRAITVNEFTATRWMKKSENGGSTVGYNVLVSQSLPTADYWYWIGISVVLVYSLFFNNMVTVALTFLNPPQKARTVIPSDDDSEKKSSRDGSNHVYETSPRAKSAREDSNKKGMILPFQPLTMTFHNVNYFVDMPKEISKQGIPETRLQLLTNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGRKTGGYIEGEIKISGYPKEQRTFARVSGYVEQNDIHSPQVTIEESLLFSSALRLPKEVGVAKRLEFVEQVMKLVELDALRNALVGMPGSSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIDIFEAFDDLLLMKRGGRVIYGGKLGVQSQIMIDYFQGIKGIPPIPNGYNPATWVLEVTTPATEEKLNIDFAEAYKNSDQYRGVESSILQFGHPPAGSEPLKFDSMYSLNLFSQFLRCLWKQNLVYWRSPSYNAMRLYFTTISALIFGTVFWDVGSKRESTQELFVVMGAMYSACMFLGVNNSSSVQPIVSIERTVFYREKAAGMYSPIAYAAAQGLIEVPYIAVQTIVFGIITYFMINFERTAAKFFLYLVFMFLTFTYFTFYGMMAVGLTPSQHLAAVISSAFYSLWNLLSGFLIPKSSIPGWWIWFYYICPIAWTLRGIITSQLGDVETIIVGPGFQGSVKEYLAVTLGYDSKINGFSAVGLSALVLIGFIILFFGSFAVSVKVLNFQKR 1435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium606g00007 1435 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 22 1435 - -
Vium606g00007 1435 MobiDBLite consensus disorder prediction 782 816 - -
Vium606g00007 1435 FunFam ABC transporter G family member 40 844 1074 - -
Vium606g00007 1435 Pfam ABC transporter 167 350 IPR003439 GO:0005524
Vium606g00007 1435 Gene3D - 153 456 IPR027417 -
Vium606g00007 1435 CDD ABCG_PDR_domain1 154 407 IPR034001 -
Vium606g00007 1435 SMART AAA_5 867 1059 IPR003593 GO:0016887
Vium606g00007 1435 SMART AAA_5 176 401 IPR003593 GO:0016887
Vium606g00007 1435 Pfam ABC-2 type transporter 1156 1368 IPR013525 GO:0016020|GO:0140359
Vium606g00007 1435 Pfam ABC-2 type transporter 506 716 IPR013525 GO:0016020|GO:0140359
Vium606g00007 1435 MobiDBLite consensus disorder prediction 784 799 - -
Vium606g00007 1435 Pfam Plant PDR ABC transporter associated 721 784 IPR013581 -
Vium606g00007 1435 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 151 425 IPR003439 GO:0005524
Vium606g00007 1435 Pfam ABC-transporter N-terminal 83 141 IPR029481 -
Vium606g00007 1435 Pfam ABC-2 type transporter 1039 1101 IPR043926 GO:0140359
Vium606g00007 1435 Pfam ABC-2 type transporter 383 433 IPR043926 GO:0140359
Vium606g00007 1435 Pfam ABC transporter 858 1010 IPR003439 GO:0005524
Vium606g00007 1435 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 164 423 IPR027417 -
Vium606g00007 1435 Gene3D - 843 1073 IPR027417 -
Vium606g00007 1435 FunFam ABC transporter G family member 34 154 459 - -
Vium606g00007 1435 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 855 1066 IPR027417 -
Vium606g00007 1435 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 830 1082 IPR003439 GO:0005524
Vium606g00007 1435 CDD ABCG_PDR_domain2 827 1065 IPR034003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium606g00007 Vium-Chr606 176002 188574 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium606g00007 855 1042 Calmodulin-binding Proteins AT2G36910 26.804 6.82e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium606g00007 K08711 - gmx:100816324 2512.64