Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6043g00009 ATGCTCCTCCCAATCCACTGTTGCTACCTCAGCACCATCGTCGCGCTGACAATCTTCCTGTCCATCAGGTCGTTTTCCGACGCTCAATCCTGCAATGGCATCCTCGTTTCTTATGCCTATACCGGCGGCTCGCGGCTGCCGCCGAATGTCTCCAACGCGGCGGAGCAGCCCTACCGGTTCGAGTCGACGTTGACAGTACTCAACAACGGCCTCGATGAACTCAAGTCGTGGAAGGTCTTCGTGGGGTTTGACCATGACGAGTTGTTGGTCTCTGCGTCCAATGCGGTTCTCGCCGACGGCACAACCCTCCCGGCCGCCGTCGGAAACGGCACTGTTTTTGCTGGCTACCCCATGACCGATCTTAAGACCGCCGTCGCCACCGCCGGAGACTTGACCCAGATGCAGGTTCAGATCAACCTCGTCGGCACCGTGTTCGGGGTGGCGCCGCCCAGTGTTCCGATGCCGAAATCCATCAATCTCGCCAATGATGGATTCGTATGTCGTGCATCCACCACCCAAGGGAAGAATGCTAGTAGTGTGTGCTGCACTAGAGATCCCAAGTTCAAAACTAACATCACCACGGATGAAGAGTTTCTGCCACGTCAGAATGGTGATCTTAGTATTATGTATGACGTGATAAGAACTTACGATTCTAATTACTGGGCTGAGGTTACTATTGCAAATCATAACCCACTTGGGAGGCTTGACAACTGGAGGTTGAGCTGGGACTGGATGAATGATGAGTTTATATATTCAATGAAAGGGGCTTATCCTTCTGTTGTTGATGCTTCTGAATGTTTGTTCGGTAAGCAAGGTACATTCTATAAGGATCTTGACTTTGCCACTGTTTTGAATTGTGAGAGAAGGCCAACCATAATTGATCTCCCCCCTACCAAGTTCAATGATTCTGACCTTGGGAAGATTCCCTTTTGCTGCCGGAATGGTACTATTTTGCCGCCCTCCATGGATCCTAGTATGTCAGCCTCAAGATTCCAAATGCAGGTTTTCAAGATGCCACCGGCGCTTAATCGATCACAACTTTCACCTCCGCAGAACTGGAGGATAAGCGGTACACTCAACCCTGACTATAAATGCGGCCCTCCTGTAAGAGTGAGTCCCACCGAAAACCCCGATCCTTCTGGCTTACCGTCGAACAAAACTGTGATGGCCAGTTGGCAGGTTGTGTGCAACATTACGACAGCCAAGGGAACATCAAGTAAATGCTGTGTTTCATTTTCGGCCTATTACAATGATTCAGTTATTCCATGCAAAACATGTGCTTGTGGATGTCCCCAGAATAGAGAGAGAACATGTAGTACTACTGCCTCAGCTATGTTGCTTCCACCAGAGGCACTTCTTGTTCCTTATGAAAACCGAACCGCCAAGGCAATTGCTTGGGCAAGCCTGAAACATTTTCCAGTGCCAAACCCGATGCCCTGTAGTGATAACTGTGGTGTGAGCATCAACTGGCATTTGCTCACGGACTACAATAAAGGATGGAGTGCAAGGGTGACACTTTTTAACTGGGGTGAGACCAATTTTGCAGACTGGTTTGCTGCAGTACAAATGGACAAAGCAGCTGCAGGTTTTGAGAAAATGTACTCTTTCAATGCAACCCTTGTAGATGGTGTAAACAACACAATTATTATGCAAGGTTTGCCAGGATTGAACTACCTTGTAGCAGAAGCTGACGGAGCTGACCCTCTGAGAGATCCTAGGGTGCCTGGTAAACAACAATCGGTGATCTCTTTCACAAAGAAACTTACTCCTGGAATCAATACGGTTCGTGGAGATGGTTTTCCCACTAAAGTTCTTTTCAATGGAGAGGAATGCTCTCTTCCTTCCGTGCTTCCAACTAGTGGTGGTTCTTGGGATGGTTTTTCATTGGGAACTTCAGTGCTACTGTCACTGTTGTCGTTCCTCTTGATGAGATGA 1935 0.4858 MLLPIHCCYLSTIVALTIFLSIRSFSDAQSCNGILVSYAYTGGSRLPPNVSNAAEQPYRFESTLTVLNNGLDELKSWKVFVGFDHDELLVSASNAVLADGTTLPAAVGNGTVFAGYPMTDLKTAVATAGDLTQMQVQINLVGTVFGVAPPSVPMPKSINLANDGFVCRASTTQGKNASSVCCTRDPKFKTNITTDEEFLPRQNGDLSIMYDVIRTYDSNYWAEVTIANHNPLGRLDNWRLSWDWMNDEFIYSMKGAYPSVVDASECLFGKQGTFYKDLDFATVLNCERRPTIIDLPPTKFNDSDLGKIPFCCRNGTILPPSMDPSMSASRFQMQVFKMPPALNRSQLSPPQNWRISGTLNPDYKCGPPVRVSPTENPDPSGLPSNKTVMASWQVVCNITTAKGTSSKCCVSFSAYYNDSVIPCKTCACGCPQNRERTCSTTASAMLLPPEALLVPYENRTAKAIAWASLKHFPVPNPMPCSDNCGVSINWHLLTDYNKGWSARVTLFNWGETNFADWFAAVQMDKAAAGFEKMYSFNATLVDGVNNTIIMQGLPGLNYLVAEADGADPLRDPRVPGKQQSVISFTKKLTPGINTVRGDGFPTKVLFNGEECSLPSVLPTSGGSWDGFSLGTSVLLSLLSFLLMR 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6043g00009 644 PANTHER COBRA-LIKE PROTEIN 7 27 637 - -
Vium6043g00009 644 Pfam COBRA-like protein 220 399 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6043g00009 Vium-Chr6043 90048 92592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6043g00009 31 618 COBRA Gene Family AT4G16120 69.712 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6043g00009 - - gmx:100803929 1197.96