Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6043g00002 ATGAGAGTTCAGAAAGAAGGAGCAAAAGATGAAGGTGGCTTTTTCCACATGTTTGACTGGACCTCAAAATCACGGAAGAAATTATTTTCAACCACGCCGGAGTCCTTGAAACAAAGAAGAAAAGTTGATGGCAACTTGGCAACTATGCTTCCCTATCTGGTGGACGAAGATGATGAAATTGGAATAGGGGGAAGTATTAGAGATAGTGGTGATCATAGCTGTGCTACTTCTGTTATAGATTCTGAAGTATGTGGAACAAGGGCCCCTGGTGTAGTTGCCAGGCTTATGGGATTGGATTCAATGCCGTCTTCTAGTTTTTCTGATCCATATTCTACCCCATATTTTGACAGCCAATGCATTCAAGATGTGCAGTACTGGAGGAAAAATCTCAATCATCTTCATGATCATCAGATTCTATATTCTGGAAAGTTGGTTGAAAAAGCTGAGGGAACCTCTAGGAACTTCATGGAGAAGCCTCTACAGACCCGTAGCAGGCCCATTGAAAAGTTTCAAACAGAAGTAATGCCTCCCAAATCAGCTAAATCTATTCCCCTTACTCACCATAAACTTTTGTCCCCAATTAAGAATCCTGGCTTTGTTCCATCAAATAATGCTACATACATAATGGAAGCTGCAGCAAAAATTATTGAACCTGGACGCCAAGCTGCTACAAAGGCTAAAGCACCTCTGGTAACATCATCAACAGTATCATTGAGGGTCAGAGACCTTAAAGAAAAAGTGGAGGCTTCACAAAAGGGACAACTAATTAGTTCATCTTCAGAGACCTCTAGAGTTAGAGATACAAAAGGAAAAAGAGAAACCTCTCTAAGAACTAGTAGGCTTTCTGAAACTTCTCATAGGTTGTCTGAGTCTAATGATGCCAAATATCTAAACGGACAATCTTTGAACAAAAGTTGGAACGGAGTTGTGGATACACCTATCAGATCATCTACTCAAGTAGAAGAAGATTGTTATTCAAAAAATAAAGGGAAGTCTATATCACTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGCTTGAGTTTTAGTAGTGGAAAAAGTTTAGTGGAGCAGAGGGAGCAATGTGACACTAAAAACTCCCAGAAGCCTCTGAAGGCGAATGTTCAAAAAGGTTTGCACATGAAATCCTCTGGTCAAGATGCTTCTAGTGTTCTCAGGCAGAATAATCAGAAACAGAATTGTCCAATGGATAAAGACAAACTACCATCAAAGCCATTGGTTTCCAATTCACAAGGTAGAAAAGTTGTCACTGGGGATTCTTCTAGTGGACGTCATAGAAGCTCTAGTAATAAATCCGTTGCAAAATCTAAAGCTGGGCCCAAAAAACCATCAACGAGTGTTTCAGACAGTGAAAAGGAAGTCTTGTATACTCGTACAAACAATTTCCCAAGGAAGAAGAGGTCTACAGACAGGGACTGGAATGATAGGGTTGTTGATAATTTATTCCTCGACAAATCACAGAAGCCTGTTCAGTCTAATGTAGTTAGTAATAAATGCCATGGTGAGGCTGAAGAAGTAAAAAAGAAAGACATGGATGTAGTTTCCTTCACATTTACCATGCCCTTGACAAGAAGCAATTCTGGTTTTGAGACATCTGGCCTAAATTCCTTGGATCAGCATATTAGAAGAGTGTTGGTTGATACTGAAACTGATAATGCAGGGTCTCCTGTAGGATACAGTGCAGTTGGTGGTGATGCCTTGGGTATTCTTTTGGATCAGAAGTTGAGGGAGTTAACATATGGAATTGGGAACTCTTGTGATGACTCTCTCAAAGCAAGGTCACCCTCCAGCACTGCACCAAAAGTTGCAGGGTCACCCACCCTTTATTCAGTTAACCTCTTTCCAGGGTTGCAACAGAATGAAGATCAAGACATGATGTCGACGGATAAATTATTCAGTAACCGCACCTGTCTTCCAGAATTATCATCCCAGCATAGGCTTCGGCTTGATAAGATGGAGGAGTGTGAGATGAATCCTATGGAAGCAGGGTTATTCAATTCAGGACAGCCGAGTCCAATATCTGTTCTTGACCCTTCTTTTTCCCATGAAAGCTGTGAATCTCCATTCAGCGCAAATGCTTCCAGTTCAGAAGACCAAAAAAGGAGGAAGCAAGTTGTGGGCTCAGGAAGTGGCTATAGAGACTTGTTTGATTCAGCATCAGCTTGGACCATGCTAAGGAAACAATCAAGTACATGTTCCCAAATGAAGATTGGACAATCAAGCACATGGGAGTTAGAGTATGTAAATGATATATTGTGTAATGTGGAGTTGATGTACATGGACTTTTCTCTTGGCAGAGCTCGTGAGATCGTGAACCCTCATCTGTTCAACCAGTTGGAAAATCGAAGGGGAAGGTTTGAGAGTGATGGTGGTGAGTGCAGAATAAGAAGGAAAGTTATATTTGATTGTGTGAGTGAGTGCTTGGACTTGAGATGCAGGCGATATGTTGGTGGAGGTTACAAAATGTGGGCAAAAGGGGTTGCAATGGTGAGAAGAAATGAATGGTTGGCAAAGGAAGTGTGGAAGGAAATTTCAAGTTGGAGAGATATGAGGGACTCAATGGTGGATGAACTGGTAGATAGGGACATGAGCATCCAATATGGACAATGGCTAGATTTTGAGGTTGATACTTTTCAACTTGGAGCAATGGTTGAAGACCAAATATTTGATTCTTTGGTTGATGAATTCGTTGCAGAAATCCTGCAACTGTAA 2739 0.4115 MRVQKEGAKDEGGFFHMFDWTSKSRKKLFSTTPESLKQRRKVDGNLATMLPYLVDEDDEIGIGGSIRDSGDHSCATSVIDSEVCGTRAPGVVARLMGLDSMPSSSFSDPYSTPYFDSQCIQDVQYWRKNLNHLHDHQILYSGKLVEKAEGTSRNFMEKPLQTRSRPIEKFQTEVMPPKSAKSIPLTHHKLLSPIKNPGFVPSNNATYIMEAAAKIIEPGRQAATKAKAPLVTSSTVSLRVRDLKEKVEASQKGQLISSSSETSRVRDTKGKRETSLRTSRLSETSHRLSESNDAKYLNGQSLNKSWNGVVDTPIRSSTQVEEDCYSKNKGKSISLAIQAKVNVQRREGLSFSSGKSLVEQREQCDTKNSQKPLKANVQKGLHMKSSGQDASSVLRQNNQKQNCPMDKDKLPSKPLVSNSQGRKVVTGDSSSGRHRSSSNKSVAKSKAGPKKPSTSVSDSEKEVLYTRTNNFPRKKRSTDRDWNDRVVDNLFLDKSQKPVQSNVVSNKCHGEAEEVKKKDMDVVSFTFTMPLTRSNSGFETSGLNSLDQHIRRVLVDTETDNAGSPVGYSAVGGDALGILLDQKLRELTYGIGNSCDDSLKARSPSSTAPKVAGSPTLYSVNLFPGLQQNEDQDMMSTDKLFSNRTCLPELSSQHRLRLDKMEECEMNPMEAGLFNSGQPSPISVLDPSFSHESCESPFSANASSSEDQKRRKQVVGSGSGYRDLFDSASAWTMLRKQSSTCSQMKIGQSSTWELEYVNDILCNVELMYMDFSLGRAREIVNPHLFNQLENRRGRFESDGGECRIRRKVIFDCVSECLDLRCRRYVGGGYKMWAKGVAMVRRNEWLAKEVWKEISSWRDMRDSMVDELVDRDMSIQYGQWLDFEVDTFQLGAMVEDQIFDSLVDEFVAEILQL 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6043g00002 912 MobiDBLite consensus disorder prediction 369 405 - -
Vium6043g00002 912 MobiDBLite consensus disorder prediction 688 715 - -
Vium6043g00002 912 Pfam Domain of unknown function (DUF4378) 753 904 IPR025486 -
Vium6043g00002 912 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 3 908 - -
Vium6043g00002 912 MobiDBLite consensus disorder prediction 345 359 - -
Vium6043g00002 912 MobiDBLite consensus disorder prediction 413 466 - -
Vium6043g00002 912 MobiDBLite consensus disorder prediction 264 290 - -
Vium6043g00002 912 Pfam DUF761-associated sequence motif 77 107 IPR032795 -
Vium6043g00002 912 MobiDBLite consensus disorder prediction 249 296 - -
Vium6043g00002 912 MobiDBLite consensus disorder prediction 345 479 - -
Vium6043g00002 912 MobiDBLite consensus disorder prediction 688 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6043g00002 Vium-Chr6043 31210 36300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6043g00002 6 910 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 30.043 2.22e-92 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6043g00002 - - gmx:102660038 1352.42