Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium603g00025 ATGCTCATGGATGTTCACCATTACCACCCTTTCTCTGTTTACTTCATTGCTTCCATTCTCTTTGTTTTCTTCATCTTATACAAGTTAGTTCAAAGCTGGAGTTCAAACAACTCCTCTACAAATTTACCTCCAGGACCTACGACATTACCTCTCATAGGGAACTTGCATCAGTTGGTAGGTTCATTGCCACATCACTCCTTGAAACTTTTGGCAGATAGGTACGGACCGTTAATGCACCTGAAACTAGGAGAGGTATCCAACATCATAGTAACTTCACCGGAGATAGCCCAAGAGGTTCTGAAAACGCATGATGTTAATTTCTCTGATAGGCCAAACCTTGCATCGGCTAGAACAGTTACTTACAACAATACGAATATAGTCTTCTCTCCATATGGAGAATATTGGAGACAAGTACGAAAGATATGCACAATGGAGCTACTGACGATAAAGCGAGTGCAATCTTTTCAGTCCATAAGGGAAGAGGAGGTGGCAGAACTGGTTAAGAAAATAGCTGCAAGTGAAGGCTGTGCTGTTAATCTCACCCAGAACATTTACCCGATGACTTGCGGAGTAGTCGCACGAGCGGCTTGTGGTAAAAAAAACAGATATCAACAAGTGTTCATTTCAAAGATTAATGAGCAATTGAAGCTCATGGGAGGGTTTTCGCTAGCTGATCTCTATCCTTCTAGCAGAGTGCTTGAAATGGCGGAGAAGGTGAAGTTTGAGAAAGTTCACAAAGAGACTGACAGGGTTTTGCAAGACATCATCGACGAACACAGAAATGGAAGTAAGTATGAAGTAGTGGAAGATCTGGTCGATGTTCTTCTCAAGTGTCAACAGGAAAACGATTCTGAAAGTCTCTTAACTGATGACAACATTAAAGCGGTCATCAAGGACATATTCGTGGCTGGAGGCACTTCATCTTCCGTAGTGGAATGGGGGATGTCAGAATTGATAAGAAACCCAAGGGTGATGGAAAAAGCACAAGCTGAGGTGAGAATAGTGTATGGTAAGAAGGGATATGTGGATGAGACAGAATTACAGAAATTGATATACTTGAAGTCCATAATCAAAGAAACATTGAGGTTGCACCCTCCTGTACCATTGTTGGTTCCGAGAGAAAGTAGAGAAAGGTGTGAAATCAATGGATATGAGATACCCTCTAAGACAAGGGTAATTATCAATGCTTGGGCAATTGGAAGAAATGCTGAGTATTGGACTGAAGCTGAGAGTTTCAAACCTGAAAGGTTTCTTAATAACTGTATCGATTTCAAAGGTGCAGACTTTGCATTTATCCCATTTGGTGGTGGAAGAAGGATCTGCCCAGGCATTACATTTGCCATCGCAAACATTGAGTTGCCACTTGCTCAGTTACTTTACCATTTTGATTGGAAGCTTCCGAACAATATGAAGAATGAAGAACTTGACATGACCGAGTCGGGAGGAATTACTCTCAGAAGAAAACATGACCTCTGCTTGATCCCCATCACTCATCAAACTTAA 1503 0.4158 MLMDVHHYHPFSVYFIASILFVFFILYKLVQSWSSNNSSTNLPPGPTTLPLIGNLHQLVGSLPHHSLKLLADRYGPLMHLKLGEVSNIIVTSPEIAQEVLKTHDVNFSDRPNLASARTVTYNNTNIVFSPYGEYWRQVRKICTMELLTIKRVQSFQSIREEEVAELVKKIAASEGCAVNLTQNIYPMTCGVVARAACGKKNRYQQVFISKINEQLKLMGGFSLADLYPSSRVLEMAEKVKFEKVHKETDRVLQDIIDEHRNGSKYEVVEDLVDVLLKCQQENDSESLLTDDNIKAVIKDIFVAGGTSSSVVEWGMSELIRNPRVMEKAQAEVRIVYGKKGYVDETELQKLIYLKSIIKETLRLHPPVPLLVPRESRERCEINGYEIPSKTRVIINAWAIGRNAEYWTEAESFKPERFLNNCIDFKGADFAFIPFGGGRRICPGITFAIANIELPLAQLLYHFDWKLPNNMKNEELDMTESGGITLRRKHDLCLIPITHQT 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium603g00025 500 CDD CYP71-like 73 491 - -
Vium603g00025 500 FunFam Cytochrome P450 71D8 35 495 - -
Vium603g00025 500 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium603g00025 500 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium603g00025 500 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium603g00025 500 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium603g00025 500 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium603g00025 500 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium603g00025 500 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium603g00025 500 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium603g00025 500 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium603g00025 500 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium603g00025 500 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium603g00025 500 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium603g00025 500 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Vium603g00025 500 Pfam Cytochrome P450 43 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium603g00025 500 SUPERFAMILY Cytochrome P450 43 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium603g00025 500 Gene3D Cytochrome P450 35 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium603g00025 500 PANTHER CYTOCHROME P450 71B11-RELATED 26 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium603g00025 Vium-Chr603 133969 135974 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium603g00025 43 495 Cytochrome P450 AT3G26330 43.011 3.54e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium603g00025 - - var:108342947 776.933