Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium603g00015 ATGACGGTGCTCTTTGTTGTGTCTCTCTTATTCTTCTCATTCTTAATGGGTTGTTCTGATGGTCAGCTTGAGGGTTGTGATGGTTCAATTCTGATTGAGAATGGTCCAGAATCAGAGAGACACGCATTTGGACATCAAGGGGTTAGAGGGTTTGATGTGATAGAAAAAGCCAAGGCAGAATTGGAAGGATCTTGTCCTGGTGTGGTTTCTTGTGCAGACATAGTGGCATTGGCAGCTAGAGAGGCTATTGTTTTGGCGAATGGACCAACATATGAAGTTCCAACAGGGAGGAGAGATGGGTTGGTTTCAAATGTTTCTCTTGCAGATGACATGCCAGATGTTAGTGATTCAATTGAGCTACTCAAGACCAAGTTTCTGAACAAGGGTCTCACAGTGAAAGACCTTGTTCTTCTCAGTGGTGCACATACAATTGGAACCACAGCATGCTTCTTTATGACTAAAAGACTGTACAACTTTTTTCCAAGTGGTGGAGGATCAGACCCATCAATTAGTCCAAATTTTCTCCCACAGTTGCAAGCAAAGTGCCCTCAGAATGGAGATGTTAATGTTAGGCTAGCCATTGACGAGGGCAGTGAGCAGAATTTTGACGTACACATTCTGAAGAACATAAAGGAAGGTTTTGCTGTGTTAGAATCTGATGCCAGACTCAATGATGACATAGCCACAAAGAATGTCATTGACTCTTACTTTTCTCCCTTGGGTCCAATGTTTGAGCCTTCTTTTGAAGCTGATTTTGTTGATTCATTCGTGAGGATGGGCCAAATTGGTGTCAAGACAGGATTCCTTGGAGAAATCAGGACAGTGTGTTCACAATTCAATTGA 843 0.4259 MTVLFVVSLLFFSFLMGCSDGQLEGCDGSILIENGPESERHAFGHQGVRGFDVIEKAKAELEGSCPGVVSCADIVALAAREAIVLANGPTYEVPTGRRDGLVSNVSLADDMPDVSDSIELLKTKFLNKGLTVKDLVLLSGAHTIGTTACFFMTKRLYNFFPSGGGSDPSISPNFLPQLQAKCPQNGDVNVRLAIDEGSEQNFDVHILKNIKEGFAVLESDARLNDDIATKNVIDSYFSPLGPMFEPSFEADFVDSFVRMGQIGVKTGFLGEIRTVCSQFN 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium603g00015 280 Pfam Peroxidase 19 236 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium603g00015 280 ProSitePatterns Peroxidases proximal heme-ligand signature. 134 144 IPR019793 -
Vium603g00015 280 CDD secretory_peroxidase 24 279 IPR033905 GO:0004601|GO:0042744
Vium603g00015 280 PANTHER PEROXIDASE 25-RELATED 19 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00015 280 SUPERFAMILY Heme-dependent peroxidases 20 280 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vium603g00015 280 FunFam Peroxidase 112 259 - -
Vium603g00015 280 PRINTS Haem peroxidase superfamily signature 87 99 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium603g00015 280 PRINTS Haem peroxidase superfamily signature 134 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium603g00015 280 PRINTS Haem peroxidase superfamily signature 69 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium603g00015 280 Gene3D - 20 280 - -
Vium603g00015 280 PRINTS Plant peroxidase signature 68 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00015 280 PRINTS Plant peroxidase signature 87 102 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00015 280 PRINTS Plant peroxidase signature 209 226 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00015 280 PRINTS Plant peroxidase signature 49 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00015 280 PRINTS Plant peroxidase signature 133 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00015 280 PRINTS Plant peroxidase signature 12 32 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00015 280 PRINTS Plant peroxidase signature 254 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00015 280 Gene3D Peroxidase, domain 2 112 259 - -
Vium603g00015 280 ProSiteProfiles Plant heme peroxidase family profile. 20 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium603g00015 Vium-Chr603 87106 89720 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium603g00015 23 280 Peroxidase AT1G77100 56.538 6.36e-91 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium603g00015 K00430 - vra:106774988 493.812