Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium603g00014 ATGACGGTGCTCTTTGTTGTGTCTCTCTTATTCTTCTCATTCTTAATGGGTTGTTCTGATGGTCAGCTTGAGGTAGGGTTCTACTCCAACACTTGTCCTCAGGTAGATTCCGTTGTCCGTGACGTTGTTAGAGAAGCTGCTCTCTCTGATACCAACATGGCTGCTGTCTTGCTCAGACTTCATTTTCATGACTGCTTTGTTGAGGGTTGTGATGGTTCAATTCTGATTGAGAATGGTCCAGAATCAGAGAGACACGCATTTGGACATCAAGGGGTTAGAGGGTTTGATGTGATAGAAAAAGCCAAGGCAGAATTGGAAGGATCTTGTCCTGGTGTGGTTTCTTGTGCAGACATAGTGGCATTGGCAGCTAGAGAGGCTATTGTTTTGGCGAATGGACCAACATATGAAGTTCCAACAGGGAGGAGAGATGGGTTGGTTTCAAATGTTTCTCTTGCAGATGACATGCCAGATGTTAGTGATTCAATTGAGCTACTCAAGACCAAGTTTCTGAACAAGGGTCTCACAGTGAAAGACCTTGTTCTTCTCAGTGGTGCACATACAATTGGAACCACAGCATGCTTCTTTATGACTAAAAGACTGTACAACTTTTTTCCAAGTGGTGGAGGATCAGACCCATCAATTAGTCCAAATTTTCTCCCACAGTTGCAAGCAAAGTGCCCTCAGAATGGAGATGTTAATGTTAGGCTAGCCATTGACGAGGGCAGTGAGCAGAATTTTGACGTACACATTCTGAAGAACATAAAGGAAGGTTTTGCTGTGTTAGAATCTGATGCCAGACTCAATGATGACATAGCCACAAAGAATGTCATTGACTCTTACTTTTCTCCCTTGGGTCCAATGTTTGAGCCTTCTTTTGAAGCTGATTTTGTTGATTCATTCGTGAGGATGGGCCAAATTGGTGTCAAGACAGGATTCCTTGGAGAAATCAGGACAGTGTGTTCACAATTCAATTGA 975 0.4318 MTVLFVVSLLFFSFLMGCSDGQLEVGFYSNTCPQVDSVVRDVVREAALSDTNMAAVLLRLHFHDCFVEGCDGSILIENGPESERHAFGHQGVRGFDVIEKAKAELEGSCPGVVSCADIVALAAREAIVLANGPTYEVPTGRRDGLVSNVSLADDMPDVSDSIELLKTKFLNKGLTVKDLVLLSGAHTIGTTACFFMTKRLYNFFPSGGGSDPSISPNFLPQLQAKCPQNGDVNVRLAIDEGSEQNFDVHILKNIKEGFAVLESDARLNDDIATKNVIDSYFSPLGPMFEPSFEADFVDSFVRMGQIGVKTGFLGEIRTVCSQFN 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium603g00014 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 178 188 IPR019793 -
Vium603g00014 324 Pfam Peroxidase 39 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium603g00014 324 ProSiteProfiles Plant heme peroxidase family profile. 22 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium603g00014 324 PRINTS Plant peroxidase signature 177 189 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00014 324 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00014 324 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00014 324 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00014 324 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00014 324 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00014 324 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00014 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00014 324 CDD secretory_peroxidase 22 323 IPR033905 GO:0004601|GO:0042744
Vium603g00014 324 FunFam Peroxidase 156 303 - -
Vium603g00014 324 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Vium603g00014 324 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium603g00014 324 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium603g00014 324 PRINTS Haem peroxidase superfamily signature 178 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium603g00014 324 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium603g00014 324 FunFam Peroxidase 26 166 - -
Vium603g00014 324 PANTHER PEROXIDASE 25-RELATED 10 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00014 324 SUPERFAMILY Heme-dependent peroxidases 22 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vium603g00014 324 Gene3D - 26 324 - -
Vium603g00014 324 Gene3D Peroxidase, domain 2 156 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium603g00014 Vium-Chr603 87105 89740 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium603g00014 1 324 Peroxidase AT1G77100 56.135 2.23e-119 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium603g00014 K00430 - vra:106774988 583.948