Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium603g00005 ATGGAGGGACGTAGTTTAAACTGTCTAATGTTTGTTTTGCTTGGTTTGACTATTGTGAACACAGGAGAAGTTAGTGGGCAAGGGACGCGTGTGGGGTTCTATTCCCGCACGTGTCCACGAGCTGAGTCCATTGTTAAGTCCACTGTTCGAGATCATCTTAAGTCCGATCCTAGTTTGGCAGCAGGGTTGCTTCGGTTGCACTTCCATGATTGCTTCGTGCAAGGTTGTGATGCTTCCGTTCTCATCGAGGGTCCTCAAACCGAGAGAACAGCATTGCCAAACCTTAGTTTAAAAGGATTCGAGGTTATTAATGATGCTAAGACACAGCTCGAGGCTGTCTGCCCCGGCGTTGTGTCATGCGCCGACATTCTTGCTCTTGCAACTCGTGATGCTGTCGACCTTAGTGATGGACCGAGTTGGAAAGTGCCTACTGGACGTAGAGATGGACGCATATCACAGGCTTCAGAAGCGAATAACTTGCCTTCTCCTTTCGATTCTGTTGCTATTCTGACGCAGAAGTTTGCAGCAAAGGGTCTCAACACTCAAGACCTCGTAGTCACTTCTGGTGGACATACAATTGGTACAACAGCTTGCCTATTCTTCAGGCACAGACTGTACAACTTCACCGGAAATGGTGGTCCTGACCCTTCCATTGACCCTACATTTCTTCCCACACTACGAGCACAGTGCCCTCAAAGTACAGGTGCTCAAAACCGTGTTGCACTGGATACTGGCAGTGAATTCGAATTTGATAGATCTTACTTTAAAAATTTGAAGAATGGACGTGGAATTTTGGAGTCTGATCAATTGCTTTGGACTGATGCTTCCACGAAGACGTTTGTGGAAGAGTACTCCGACTCAGCGCTGCGTTTCAAATCGGACTTTGCAAAGTCTATGGTGAAGATGGGCAACATTGAGCTGAAGACGGGTTCTGATAGTGAAATTCGAACCATATGTTCTGCCATTAACTAG 972 0.4681 MEGRSLNCLMFVLLGLTIVNTGEVSGQGTRVGFYSRTCPRAESIVKSTVRDHLKSDPSLAAGLLRLHFHDCFVQGCDASVLIEGPQTERTALPNLSLKGFEVINDAKTQLEAVCPGVVSCADILALATRDAVDLSDGPSWKVPTGRRDGRISQASEANNLPSPFDSVAILTQKFAAKGLNTQDLVVTSGGHTIGTTACLFFRHRLYNFTGNGGPDPSIDPTFLPTLRAQCPQSTGAQNRVALDTGSEFEFDRSYFKNLKNGRGILESDQLLWTDASTKTFVEEYSDSALRFKSDFAKSMVKMGNIELKTGSDSEIRTICSAIN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium603g00005 323 SUPERFAMILY Heme-dependent peroxidases 30 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vium603g00005 323 FunFam Peroxidase 161 302 - -
Vium603g00005 323 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Vium603g00005 323 PANTHER PEROXIDASE 25-RELATED 14 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00005 323 Pfam Peroxidase 45 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium603g00005 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium603g00005 323 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium603g00005 323 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium603g00005 323 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium603g00005 323 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium603g00005 323 Gene3D - 32 323 - -
Vium603g00005 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00005 323 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00005 323 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00005 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00005 323 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00005 323 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00005 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00005 323 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00005 323 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium603g00005 323 Gene3D Peroxidase, domain 2 161 302 - -
Vium603g00005 323 ProSiteProfiles Plant heme peroxidase family profile. 28 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium603g00005 323 CDD secretory_peroxidase 30 322 IPR033905 GO:0004601|GO:0042744
Vium603g00005 323 FunFam Peroxidase 32 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium603g00005 Vium-Chr603 42120 43308 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium603g00005 8 323 Peroxidase AT2G41480 59.190 7.47e-142 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium603g00005 K00430 - gmx:100783523 460.685