Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium6036g00003 | ATGCTTAAGATTTNCTCCTGCTGTCCGCACCGCCGCTCCTGGGATTTTGCTCCAGCGCCCACCGCTCCTGCAGTCCGCACCGCCAGCACCACCGCACGGTCAGCTACCCTTCTCTCTCTCTTCACCGCCGTGCAACAGGGTGACCTCCAAATTGTCACCACACTCTTAGAGGCCGACCCCTCTCTCTTCCACCAAACCACTCTCTACGATCGCCACTCTCCGCTTCATATTGCCGCAGCCAATGCCCAGATCGAGATTCTCTCTAGGCTTTTGGATGGATCTCTCAACCCAGATGTTTTGAATCGCCACAAACAGACTCCGCTTATGTTGGCAGCAAGGCACGGGAACATCGCGTGTGTCGAGAAGCTTCTTCAAGCCGGAGCTAATGTAATGTTTCGATTTCATTGA | 408 | 0.5441 | MLKIXSCCPHRRSWDFAPAPTAPAVRTASTTARSATLLSLFTAVQQGDLQIVTTLLEADPSLFHQTTLYDRHSPLHIAAANAQIEILSRLLDGSLNPDVLNRHKQTPLMLAARHGNIACVEKLLQAGANVMFRFH | 135 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium6036g00003 | 135 | SMART | ANK_2a | 103 | 132 | IPR002110 | GO:0005515 | |
Vium6036g00003 | 135 | SMART | ANK_2a | 70 | 99 | IPR002110 | GO:0005515 | |
Vium6036g00003 | 135 | SMART | ANK_2a | 35 | 64 | IPR002110 | GO:0005515 | |
Vium6036g00003 | 135 | ProSiteProfiles | Ankyrin repeat region circular profile. | 70 | 102 | - | - | |
Vium6036g00003 | 135 | ProSiteProfiles | Ankyrin repeat profile. | 103 | 130 | IPR002110 | GO:0005515 | |
Vium6036g00003 | 135 | ProSiteProfiles | Ankyrin repeat region circular profile. | 103 | 130 | - | - | |
Vium6036g00003 | 135 | Gene3D | - | 29 | 134 | IPR036770 | - | |
Vium6036g00003 | 135 | PANTHER | ROLLING PEBBLES, ISOFORM B | 30 | 128 | - | - | |
Vium6036g00003 | 135 | Pfam | Ankyrin repeats (3 copies) | 40 | 130 | IPR002110 | GO:0005515 | |
Vium6036g00003 | 135 | ProSiteProfiles | Ankyrin repeat profile. | 70 | 102 | IPR002110 | GO:0005515 | |
Vium6036g00003 | 135 | SUPERFAMILY | Ankyrin repeat | 39 | 131 | IPR036770 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium6036g00003 | Vium-Chr6036 | 7359 | 7949 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium6036g00003 | 18 | 108 | MAP Kinase Kinase Kinase | AT1G14000 | 30.769 | 1.44e-08 | 50.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium6036g00003 | - | - | vum:124842273 | 236.498 |