Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6018g00003 ATGTACATCGAGGTTTGGCAGAAGGCGGCCGTTCATTCTGGCAGGATCTCTTATGATATCTGTGGCTACATTGGATATGTATTAGGTGATACACACGAGCATTGCAGAACATTTAAAGGAACCCGAACAAGGGCTGCTCTTGTATTTATTCTTGGGTTCTGGATGCTGGACCTTGCTAACAACACGGTGCAGGGTCCTGCTCGAGCACTTTTGGCTGATCTGTCTGGTCCTGATCAACGTAATGTGGCAAATGCTATATTTTGCTCATGGATGGCAGCTGGGAACATCCTAGGATATTCTTCTGGTGCTAGTGGAAAGTGGAACAAATGGTTCCCTTTCCTGACCACAAGAGCTTGCTGCGAAGCCTGTGGCAATCTTAAGGCAGCATTTCTTGTGGCTGTGGTGTTTCTGGCATTATGCACATTTGTCACCCTTTATTTTGCTGATGAGGTTCCACTTACCACTGCAAGTCAACATCATCACTTGTCAGATTTTTCTCCTTTATTGGATGAACAACAACAAAATGGTGTTGAATTTTCAAAATCAAGGCCTTTATCTGTTATGGGTGAATCCAATGACCAGAGAACTGAAGATCACATTGGGAAAGAGGCAGAGCTAAATCATAAGAATTTCAAAGCTGGGGAAGATCATATTGAAAATGTAATGGATGGGCCTGGAGCAGTATTGGTAAACTTGTTGACAAGTTTAAGGCATTTGCCTCCTGCTATGCATTCAGTCCTGATTGTAATGGCTCTCACTTGGTTGTCATGGTTTCCCTTCTTTCTGTTTGACACGGATTGGATGGGGAGAGAAGTTTATCATGGTGATCCAAAAGGGGGCACTTCTGAAATAGATCTTTACGATCAAGGTGTTAGAGAAGGTGCATTTGGTTTGCTATTGAATTCAGTTGTCCTTGGAATTAGCTCTTTTTTCATTGAACCAATGTGTAAGTGGATGGGCACGAAATTGGTATGGGCGCTGAGCAATTTTATTGTCTTTGTCTGCATGGCTGGCACTGCTATCATTAGTCTGATTTCCATTCGAAATCATTCTGGAGGGATAGAACATGTAATTGGAGCAAGTGTAGCAATCAAGATTGCTTCCTTGGTTGTGTTTGTTCTTCTTGGTTTTCCTCTTGCGATTACCTACAGTGTACCCTTTGCTGTCACAGCAGAGTTGACTGCTGATTCAGGAGGTGGCCAAGGATTGGCCATAGGAGTTCTAAATCTTGCAATTGTTGTTCCTCAGATTGTTATATCCCTTGGTTGTGGTCCCTGGGATGCTCTCTTTGGTGGTGGAAATATTCCTGCCTTTGTTCTGGCCTCCGTTTGTGCTCTGGCTGGTGGTATAATTGCAACTCTCAAACTGCCAAATCTATCTAGCAATTTCCAGTCAACAGGATTTCATATGGGTTAG 1416 0.4329 MYIEVWQKAAVHSGRISYDICGYIGYVLGDTHEHCRTFKGTRTRAALVFILGFWMLDLANNTVQGPARALLADLSGPDQRNVANAIFCSWMAAGNILGYSSGASGKWNKWFPFLTTRACCEACGNLKAAFLVAVVFLALCTFVTLYFADEVPLTTASQHHHLSDFSPLLDEQQQNGVEFSKSRPLSVMGESNDQRTEDHIGKEAELNHKNFKAGEDHIENVMDGPGAVLVNLLTSLRHLPPAMHSVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGGTSEIDLYDQGVREGAFGLLLNSVVLGISSFFIEPMCKWMGTKLVWALSNFIVFVCMAGTAIISLISIRNHSGGIEHVIGASVAIKIASLVVFVLLGFPLAITYSVPFAVTAELTADSGGGQGLAIGVLNLAIVVPQIVISLGCGPWDALFGGGNIPAFVLASVCALAGGIIATLKLPNLSSNFQSTGFHMG 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6018g00003 471 MobiDBLite consensus disorder prediction 192 206 - -
Vium6018g00003 471 Gene3D MFS general substrate transporter like domains 35 159 IPR036259 -
Vium6018g00003 471 FunFam Sucrose transport protein SUT5 244 464 - -
Vium6018g00003 471 SUPERFAMILY MFS general substrate transporter 47 457 IPR036259 -
Vium6018g00003 471 PANTHER SUGAR TRANSPORTER 20 454 - -
Vium6018g00003 471 MobiDBLite consensus disorder prediction 183 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6018g00003 Vium-Chr6018 92764 97824 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6018g00003 1 471 Sucrose Transporter Gene Family AT2G02860 67.722 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6018g00003 K15378 - gmx:100793185 842.417