Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6018g00002 ATGGCGGGGAAGTCAGACACAGTGTCGATCCGCGTTCCTTACAAGAACCTCCACGACGATTCTTCCGCTCCCGAACTCGAACTCGTAGATGTCGACCACCGGGGCCACCGGATCCACGTCAACTCGCCGCCGTCAATTCACTCGCCTTCGCCGCCAAGCAACAGAGCTTCCTTGGTCAATCTCGTTCTCAGTTGCACCGTAGCCGCTGGCGTCCAATTCGGTTGGGCCTTGCAGCTCTCTCTCTTAACGCCCTACATTCAGACGTTGGGAATAGGACATGCTTTTTCTTCTTTTATCTGGCTTTGTGGCCCCATTACAGGCCTTGTGGTTCAACCCTGCGTTGGTGTTTGGAGTGATAAATGTACATCGAGGTTTGGCAGAAGGCGGCCGTTCATTCTGGCAGGATCTCTTATGATATCTGTGGCTGTGATATTAATCGGATTTTCTGCAGACATTGGATATGTATTAGGTGATACACACGAGCATTGCAGAACATTTAAAGGAACCCGAACAAGGGCTGCTCTTGTATTTATTCTTGGGTTCTGGATGCTGGACCTTGCTAACAACACGGTGCAGGGTCCTGCTCGAGCACTTTTGGCTGATCTGTCTGGTCCTGATCAACGTAATGTGGCAAATGCTATATTTTGCTCATGGATGGCAGCTGGGAACATCCTAGGATATTCTTCTGGTGCTAGTGGAAAGTGGAACAAATGGTTCCCTTTCCTGACCACAAGAGCTTGCTGCGAAGCCTGTGGCAATCTTAAGGCAGCATTTCTTGTGGCTGTGGTGTTTCTGGCATTATGCACATTTGTCACCCTTTATTTTGCTGATGAGGTTCCACTTACCACTGCAAGTCAACATCATCACTTGTCAGATTTTTCTCCTTTATTGGATGAACAACAACAAAATGGTGTTGAATTTTCAAAATCAAGGCCTTTATCTGTTATGGGTGAATCCAATGACCAGAGAACTGAAGATCACATTGGGAAAGAGGCAGAGCTAAATCATAAGAATTTCAAAGCTGGGGAAGATCATATTGAAAATGTAATGGATGGGCCTGGAGCAGTATTGGTAAACTTGTTGACAAGTTTAAGGCATTTGCCTCCTGCTATGCATTCAGTCCTGATTGTAATGGCTCTCACTTGGTTGTCATGGTTTCCCTTCTTTCTGTTTGACACGGATTGGATGGGGAGAGAAGTTTATCATGGTGATCCAAAAGGGGGCACTTCTGAAATAGATCTTTACGATCAAGGTGTTAGAGAAGGTGCATTTGGTTTGCTATTGAATTCAGTTGTCCTTGGAATTAGCTCTTTTTTCATTGAACCAATGTGTAAGTGGATGGGCACGAAATTGGTATGGGCGCTGAGCAATTTTATTGTCTTTGTCTGCATGGCTGGCACTGCTATCATTAGTCTGATTTCCATTCGAAATCATTCTGGAGGGATAGAACATGTAATTGGAGCAAGTGTAGCAATCAAGATTGCTTCCTTGGTTGTGTTTGTTCTTCTTGGTTTTCCTCTTGCGATTACCTACAGTGTACCCTTTGCTGTCACAGCAGAGTTGACTGCTGATTCAGGAGGTGGCCAAGGATTGGCCATAGGAGTTCTAAATCTTGCAATTGTTGTTCCTCAGATTGTTATATCCCTTGGTTGTGGTCCCTGGGATGCTCTCTTTGGTGGTGGAAATATTCCTGCCTTTGTTCTGGCCTCCGTTTGTGCTCTGGCTGGTGGTATAATTGCAACTCTCAAACTGCCAAATCTATCTAGCAATTTCCAGTCAACAGGATTTCATATGGGTTAG 1800 0.4544 MAGKSDTVSIRVPYKNLHDDSSAPELELVDVDHRGHRIHVNSPPSIHSPSPPSNRASLVNLVLSCTVAAGVQFGWALQLSLLTPYIQTLGIGHAFSSFIWLCGPITGLVVQPCVGVWSDKCTSRFGRRRPFILAGSLMISVAVILIGFSADIGYVLGDTHEHCRTFKGTRTRAALVFILGFWMLDLANNTVQGPARALLADLSGPDQRNVANAIFCSWMAAGNILGYSSGASGKWNKWFPFLTTRACCEACGNLKAAFLVAVVFLALCTFVTLYFADEVPLTTASQHHHLSDFSPLLDEQQQNGVEFSKSRPLSVMGESNDQRTEDHIGKEAELNHKNFKAGEDHIENVMDGPGAVLVNLLTSLRHLPPAMHSVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGGTSEIDLYDQGVREGAFGLLLNSVVLGISSFFIEPMCKWMGTKLVWALSNFIVFVCMAGTAIISLISIRNHSGGIEHVIGASVAIKIASLVVFVLLGFPLAITYSVPFAVTAELTADSGGGQGLAIGVLNLAIVVPQIVISLGCGPWDALFGGGNIPAFVLASVCALAGGIIATLKLPNLSSNFQSTGFHMG 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6018g00002 599 FunFam Sucrose transport protein SUT5 372 592 - -
Vium6018g00002 599 PANTHER SUGAR TRANSPORTER 55 582 - -
Vium6018g00002 599 CDD MFS_SLC45_SUC 61 580 - -
Vium6018g00002 599 MobiDBLite consensus disorder prediction 320 334 - -
Vium6018g00002 599 SUPERFAMILY MFS general substrate transporter 60 585 IPR036259 -
Vium6018g00002 599 FunFam Sucrose transporter SUC2 59 283 - -
Vium6018g00002 599 Pfam MFS/sugar transport protein 76 224 - -
Vium6018g00002 599 MobiDBLite consensus disorder prediction 311 334 - -
Vium6018g00002 599 Gene3D MFS general substrate transporter like domains 55 583 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6018g00002 Vium-Chr6018 92251 97824 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6018g00002 144 599 Sucrose Transporter Gene Family AT2G02860 68.410 0.0 648
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6018g00002 K15378 - gmx:100793185 1098.19