Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6012g00003 ATGGAACTCTCTCTGTTCCACCATCAGCACCATCCTATGATGTTCCTCAATTGCCCCATTAGCTTAACAAGAACACACACAACACTTAACAAGAAAAATTCATACAGGTTATCATGCCACTGTTCATGTTCTTCCACAAAAAACACTACAGCAGAACCAGTTACAGTGTCTTCTTTGAGTATTGAAGGAAGGAGAGCATTACTCAGTTGTCTCCTCACAACTTTTTGTGGAGTCTATGCATGTGATGTGGCTGGAGCTGTTAGCACAAGTAGAAGAGCTCTAAGAGGAGCAAAAATTCCTGAAAGTGATTATACAACCTTACCCAATGGCTTGAAGTACTATGATTTGAAGGTCGGGAATGGAGCCGAAGCTAAAAAGGGATCTCGTGTTGCAATTCACTATGTGGCCAAATGGAAGGGTATCACCTTTATGACTAGTAGACAAGGAATGGGTGTTGGAGGAGGAACGCCCTATGGATTTGATGTAGGGCAATCAGAGAGAGGAACAGTCCTTAAAGGGTTGGATTTAGGCGTAGAGGGCATGCGAGTAGGAGGCCAGCGACTATTGATTGTTCCTCCTGAACTTGCCTATGGAAGCAAGGGAGTGCAAGAAATCCCTCCTAATTCAACGATTGAGTTGGACATTGAACTGCTTTCTATCAAACAAAGTCCATTCGGGACTCCTGTAAAGATAGTTGAAGGTTAA 705 0.4326 MELSLFHHQHHPMMFLNCPISLTRTHTTLNKKNSYRLSCHCSCSSTKNTTAEPVTVSSLSIEGRRALLSCLLTTFCGVYACDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGNGAEAKKGSRVAIHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVEGMRVGGQRLLIVPPELAYGSKGVQEIPPNSTIELDIELLSIKQSPFGTPVKIVEG 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6012g00003 234 Gene3D - 87 225 IPR046357 GO:0003755
Vium6012g00003 234 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 101 228 - -
Vium6012g00003 234 SUPERFAMILY FKBP-like 99 221 - -
Vium6012g00003 234 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 123 218 IPR001179 GO:0003755
Vium6012g00003 234 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 127 221 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6012g00003 Vium-Chr6012 9213 12479 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6012g00003 116 220 Calmodulin-binding Proteins AT5G48570 32.727 7.30e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6012g00003 - - vun:114191590 452.21