Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vium6012g00003 | ATGGAACTCTCTCTGTTCCACCATCAGCACCATCCTATGATGTTCCTCAATTGCCCCATTAGCTTAACAAGAACACACACAACACTTAACAAGAAAAATTCATACAGGTTATCATGCCACTGTTCATGTTCTTCCACAAAAAACACTACAGCAGAACCAGTTACAGTGTCTTCTTTGAGTATTGAAGGAAGGAGAGCATTACTCAGTTGTCTCCTCACAACTTTTTGTGGAGTCTATGCATGTGATGTGGCTGGAGCTGTTAGCACAAGTAGAAGAGCTCTAAGAGGAGCAAAAATTCCTGAAAGTGATTATACAACCTTACCCAATGGCTTGAAGTACTATGATTTGAAGGTCGGGAATGGAGCCGAAGCTAAAAAGGGATCTCGTGTTGCAATTCACTATGTGGCCAAATGGAAGGGTATCACCTTTATGACTAGTAGACAAGGAATGGGTGTTGGAGGAGGAACGCCCTATGGATTTGATGTAGGGCAATCAGAGAGAGGAACAGTCCTTAAAGGGTTGGATTTAGGCGTAGAGGGCATGCGAGTAGGAGGCCAGCGACTATTGATTGTTCCTCCTGAACTTGCCTATGGAAGCAAGGGAGTGCAAGAAATCCCTCCTAATTCAACGATTGAGTTGGACATTGAACTGCTTTCTATCAAACAAAGTCCATTCGGGACTCCTGTAAAGATAGTTGAAGGTTAA | 705 | 0.4326 | MELSLFHHQHHPMMFLNCPISLTRTHTTLNKKNSYRLSCHCSCSSTKNTTAEPVTVSSLSIEGRRALLSCLLTTFCGVYACDVAGAVSTSRRALRGAKIPESDYTTLPNGLKYYDLKVGNGAEAKKGSRVAIHYVAKWKGITFMTSRQGMGVGGGTPYGFDVGQSERGTVLKGLDLGVEGMRVGGQRLLIVPPELAYGSKGVQEIPPNSTIELDIELLSIKQSPFGTPVKIVEG | 234 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vium6012g00003 | 234 | Gene3D | - | 87 | 225 | IPR046357 | GO:0003755 | |
Vium6012g00003 | 234 | PANTHER | FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA | 101 | 228 | - | - | |
Vium6012g00003 | 234 | SUPERFAMILY | FKBP-like | 99 | 221 | - | - | |
Vium6012g00003 | 234 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 123 | 218 | IPR001179 | GO:0003755 | |
Vium6012g00003 | 234 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 127 | 221 | IPR001179 | GO:0003755 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Vium6012g00003 | Vium-Chr6012 | 9213 | 12479 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vium6012g00003 | 116 | 220 | Calmodulin-binding Proteins | AT5G48570 | 32.727 | 7.30e-07 | 47.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vium6012g00003 | - | - | vun:114191590 | 452.21 |