Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6003g00003 ATGAGTTTTGTCTTCCGAGGGAGTAGGGGAGATATTGAAAGTGGATTTTCAGAATATGTTCCTGAAAGAACCTTGATGAGGGTTCATCCAGCTCGCCCAGTTAATGGCAATTCTTTAGCTTTTCTTATCACAGTTATTTTGATATTCATGATATTGAACTCCCCTCAAATGCTACATCATTTTTTGCTCTGGGTTGTACTGGCTATCTTTGTGATGGCTACAAGTCTGAGGATGTATGCAACTTGTCAACAACTTCAGGCACAGGCTAGGGCTCATGCTGCAGCAGCCTCTGGGTTGCTTGGCCATACTGAACTCCGTCTTCACATGCCACCATCGATTGCAATTGCAACCAGAGGAAGATTGCAGGGACTTAGACTTCAGCTTGCACTTCTTGACCGTGAATTTGATGAGCTAGATTATGATACTTTGAGAGCTCTTGACACTGATACTGCTCCTAGTACCCATTCAATGACTGAGGAAGAGATAAATGCCTTGCCTATTCACACATATAAAATTCCAGTCCCACCAAAGGATGGCTCAGCCGGTCTTGCATCCTCTTCAGGTGCAGCTGAGGTAAACATATGTTAA 588 0.4371 MSFVFRGSRGDIESGFSEYVPERTLMRVHPARPVNGNSLAFLITVILIFMILNSPQMLHHFLLWVVLAIFVMATSLRMYATCQQLQAQARAHAAAASGLLGHTELRLHMPPSIAIATRGRLQGLRLQLALLDREFDELDYDTLRALDTDTAPSTHSMTEEEINALPIHTYKIPVPPKDGSAGLASSSGAAEVNIC 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium6003g00003 195 PANTHER TARGET OF ERK KINASE MPK-1 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium6003g00003 Vium-Chr6003 7172 11750 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6003g00003 1 191 C3H Transcription Factor Family AT3G55530 73.196 5.04e-87 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium6003g00003 K16283 - gmx:100805406 322.013