Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vium6003g00002 ATGAGTTTTGTCTTCCGAGGGAGTAGGGGAGATATTGAAAGTGGATTTTCAGAATATGTTCCTGAAAGAACCTTGATGAGGGTTCATCCAGCTCGCCCAGTTAATGGCAATTCTTTAGCTTTTCTTATCACAGTTATTTTGATATTCATGATATTGAACTCCCCTCAAATGCTACATCATTTTTTGCTCTGGGTTGTACTGGCTATCTTTGTGATGGCTACAAGTCTGAGGATGTATGCAACTTGTCAACAACTTCAGGCACAGGCTAGGGCTCATGCTGCAGCAGCCTCTGGGTTGCTTGGCCATACTGAACTCCGTCTTCACATGCCACCATCGATTGCAATTGCAACCAGAGGAAGATTGCAGGGACTTAGACTTCAGCTTGCACTTCTTGACCGTGAATTTGATGAGCTAGATTATGATACTTTGAGAGCTCTTGACACTGATACTGCTCCTAGTACCCATTCAATGACTGAGGAAGAGATAAATGCCTTGCCTATTCACACATATAAAATTCCAGTCCCACCAAAGGATGGCTCAGCCGGTCTTGCATCCTCTTCAGGTGCAGCTGAGGTAAACATATGTTAA 588 0.4371 MSFVFRGSRGDIESGFSEYVPERTLMRVHPARPVNGNSLAFLITVILIFMILNSPQMLHHFLLWVVLAIFVMATSLRMYATCQQLQAQARAHAAAASGLLGHTELRLHMPPSIAIATRGRLQGLRLQLALLDREFDELDYDTLRALDTDTAPSTHSMTEEEINALPIHTYKIPVPPKDGSAGLASSSGAAEVNIC 195
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vium6003g00002 195 PANTHER TARGET OF ERK KINASE MPK-1 1 183 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vium6003g00002 Vium-Chr6003 7170 11750 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium6003g00002 1 191 C3H Transcription Factor Family AT3G55530 73.196 5.04e-87 255