LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium595g00001	ATGAAGAACTTAAATGAAAAAGGCTCTGGTTCTACCCATTTAACAGCTCCTTATGCTCTTGGATGCTCGTCATGGGGGGCTTCCTCTGAATCTGATGTTCAACAATCATCCATGTCCAGAGGTTTGACCTTGAAAATGGGTGTTCTGCCGCAGCAAGGCCGTAAGACTAAGCCATTGAATTTTCATTATCAAGACCGAGATTCTTCTTCATCTCAATCAACTGGTCAGTCTTATCCGGAAGTTGGTTCAGCGCAATCAGGTCAATTTTCAGTTCAGTGTAGCAATTCTTCTGCTTGTTCGACACTTAACACAGCTGGGAGAAAGAGTATAGAAGGTGTAATCAGGTCATCTGTTCGTGGTCAGGATTTTACCTTACCTCCTTCACAAATGTGTCACAACCAGCCACTTGCTCATACTGCATTCCATCTTGCTGAGCCATGCTTTAGTGGCCTACTAGCTTCTCCATATGGCCCACAACCTAATATTCATCCTGCTCAGCTGATAGGAATGCCTACTGCTAGAATTCCTCTGCCACTTGATCTTAGTGAGGAGCCTATATTTGTGAATGCAAAGCAGTACCATGCTATTCTAGGCGCAGACAATACCGGGCAAAACTTGAATCACAGAACAAACTCATCAAAGAACGGAAACCATATTTCACGAGTCTCGCCATCTACATGCATTGAAGAGAGCCAGAGGTTCTGGTGGTCGCTTCTTGAATACAAAAAAGCATGA	735	0.4395	MKNLNEKGSGSTHLTAPYALGCSSWGASSESDVQQSSMSRGLTLKMGVLPQQGRKTKPLNFHYQDRDSSSSQSTGQSYPEVGSAQSGQFSVQCSNSSACSTLNTAGRKSIEGVIRSSVRGQDFTLPPSQMCHNQPLAHTAFHLAEPCFSGLLASPYGPQPNIHPAQLIGMPTARIPLPLDLSEEPIFVNAKQYHAILGADNTGQNLNHRTNSSKNGNHISRVSPSTCIEESQRFWWSLLEYKKA	244

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium595g00001	244	PANTHER	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	39	197	IPR001289	GO:0003700\|GO:0006355
	Vium595g00001	244	MobiDBLite	consensus disorder prediction	63	83	-	-
	Vium595g00001	244	MobiDBLite	consensus disorder prediction	59	83	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium595g00001	Vium-Chr595	3528	7665	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vium595g00001	9	197	CCAAT-HAP2 Transcription Factor Family	AT1G17590	36.410	7.05e-17	76.6

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vium595g00001	K08064		-	gmx:100500765	294.664