LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium5921g00002	ATGGGAGCAGCGATTCTCCCAGATCTCGGAACTGAGATTCTCATTCCCGTCTGCGCGGTCATTGGAATCGCCTTCGCCCTCTTCCAGTGGCTCCTCGTCTCCAAGGTCAAACTCTCTGCCGTCAGAGACGCTTCTCCCAACGCCGCCGCCAAGAATGGCTACAACGACTACCTCATCGAAGAAGAGGAGGGCATCAACGACCATAACGTCGTTGTCAAATGCGCCGAAATACAGAACGCCATTTCCGAAGGAGCAACCTCTTTCCTTTTTACTGAATACAAGTATGTAGGAATCTTCATGGTGGCTTTTGCCATTTTGATATTCCTCTTCCTTGGTTCAGTGGAGGGATTCAGCACAAGCCCCCAGGCTTGCACATACGATAAAACTAAAACGTGTAAGCCAGCACTGGCAACGGCTATTTTCAGCACCATATCTTTCCTGCTTGGTGGCGTCACATCACTTGTTTCTGGATTCCTTGGAATGAAAATTGCAACTTACGCCAATGCAAGAACCACCTTGGAGGCAAGAAAGGGTGTTGGGAAGGCCTTCATTACGGCTTTTAGATCTGGTGCTGTTATGGGTTTTCTCCTAGCCGCAAATGGTCTTCTAGTTCTTTACATTGCCATCAACTTGTTTAAGATCTATTATGGTGATGACTGGGGTGGTCTTTTTGAGGCCATAACTGGTTATGGTCTCGGTGGGTCTTCTATGGCTTTGTTTGGAAGAGTTGGTGGAGGTATTTATACCAAGGCTGCTGATGTTGGTGCTGATCTCGTTGGCAAGGTTGAGAGAAACATTCCCGAAGATGATCCAAGAAATCCAGCTGTGATTGCTGACAATGTTGGTGACAATGTCGGAGATATAGCTGGTATGGGATCTGATCTGTTTGGTTCATATGCGGAGTCATCTTGTGCTGCACTTGTTGTTGCTTCCATCTCCTCATTTGGGTTGAATCATGAGTTTACTGCAATGCTCTACCCTCTCATTGTCAGTTCTGTGGGTATCCTTGTTTGTTTGCTCACCACCTTATTTGCAACTGACTTCTTTGAGATCAAGGCTGTGAAGGAGATTGAGCCTGCATTGAAAAAACAGCTTGTTATTTCCACTGTGCTGATGACTATTGGGGTTGCAGTTGTTAGTTTTGTTGCACTTCCAACTTCCTTCACTATCTTCAATTTTGGTGTGCAGAAAGACGTCAAGAGCTGGCAGCTATTTTTGTGTGTTGCTGTTGGTCTTTGGGCAGGACTTATTATCGGATTTGTAACTGAGTACTATACTAGTAACGCATATAGTCCTGTTCAAGACGTTGCTGACTCCTGCAGAACTGGTGCTGCAACTAATGTTATATTTGGCCTTGCCTTAGGATACAAGTCTGTTATCATTCCAATTTTTGCTATAGCAATTAGTATTTTTGTTAGTTTCACCTTTGCTGCCATGTATGGTATTGCCGTTGCTGCACTTGGGATGCTGAGTACCATTGCCACTGGGTTGGCCATAGACGCATATGGTCCAATCAGTGACAATGCTGGAGGTATTGCTGAGATGGCTGGCATGAGTCACAGAATTCGTGAGAGAACTGATGCTCTTGATGCTGCTGGTAACACTACAGCTGCAATTGGGAAGGGCTTTGCCATTGGTTCTGCCGCCCTTGTATCTCTGGCCCTTTTTGGTGCCTTTGTGAGCCGAGCATCTATTACGACTGTTGACGTGTTGACTCCAAAGGTTTTCATTGGTTTAATTGTGGGGGCAATGCTTCCTTACTGGTTTTCTGCCATGACCATGAAGAGTGTGGGAAGTGCTGCTCTGAAGATGGTTGAGGAAGTGCGCAGGCAATTCAATACCATCCCAGGGTTGATGGAGGGAACTGCCAAGCCTGACTATGCTACGTGTGTTAAGATCTCTACTGATGCTTCCATTAAAGAAATGATTCCACCTGGTGCTCTTGTCATGCTTACACCTCTTGTTGTTGGGATCCTTTTTGGTGTCGAAACACTTTCTGGTGTCCTTGCTGGATCTTTGGTATCTGGTGTACAGATTGCCATCTCTGCATCCAACACCGGCGGTGCATGGGATAATGCAAAGAAGTACATTGAGGCTGGTGCTTCTGAGCATGCCAGAAGCCTTGGTCCAAAAGGGTCAGATTGCCACAAGGCAGCAGTTATTGGTGACACCATTGGAGACCCTCTCAAGGATACATCTGGTCCCTCACTTAACATCCTTATCAAGCTGATGGCAGTTGAGTCTCTTGTTTTTGCCCCCTTCTTTGCTACCCATGGTGGTTTACTCTTCAAGATCTTCTAA	2301	0.462	MGAAILPDLGTEILIPVCAVIGIAFALFQWLLVSKVKLSAVRDASPNAAAKNGYNDYLIEEEEGINDHNVVVKCAEIQNAISEGATSFLFTEYKYVGIFMVAFAILIFLFLGSVEGFSTSPQACTYDKTKTCKPALATAIFSTISFLLGGVTSLVSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKIYYGDDWGGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGLNHEFTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQLVISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRASITTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASIKEMIPPGALVMLTPLVVGILFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDCHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF	766

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium5921g00002	766	Pfam	Inorganic H+ pyrophosphatase	23	751	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Vium5921g00002	766	PIRSF	H+-PPtase	12	764	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Vium5921g00002	766	PANTHER	K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP	6	756	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Vium5921g00002	766	Hamap	Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA].	9	756	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600
	Vium5921g00002	766	NCBIfam	V-type H(+)-translocating pyrophosphatase	11	761	IPR004131	GO:0004427\|GO:0009678\|GO:0016020\|GO:1902600

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium5921g00002	Vium-Chr5921	13070	17685	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vium5921g00002	4	629	Primary Pumps ATPases	AT1G15690	87.599	0.0	1115

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vium5921g00002	K23025		-	gmx:100775864	1432.16