Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium591g00020 ATGAGTGAAAAATTGCAATTGGAGCTTTCAAAAGCATATGCGCGTTTGGTCCATTCGAAGTGTGAAGTGGGTTCTATTGTGCCAAATCCCTTTCTTTTGCGTTCGTCTTCGCTCGGGAATCTCGTCGAAAGGGTTAAGCAGCTTGGTACCCTCGCCGTCTCCGCCGTCATTGGGAACATCTTCTCTGCGATCTTTACCTTCTGCTTTGCATTAGTGGGAACTTCGTTGGGGGCCTTGACTGGAGCTTTGATAGGACAAGAAACTGAGAGTGGCTTCATTCGAGGGGCTGCTGTTGGAGCCATATCAGGAACTGTATTTTCCATTGAAGTGTTTGAATTGTCTCTTGTTCTTTGGCAATTTGACGAATCTGGAATTGGCTGCATGTTATATTTGGAGAGTTTACTTAGCTTTCAGGGCCTTGTTGATGTATAG 432 0.4537 MSEKLQLELSKAYARLVHSKCEVGSIVPNPFLLRSSSLGNLVERVKQLGTLAVSAVIGNIFSAIFTFCFALVGTSLGALTGALIGQETESGFIRGAAVGAISGTVFSIEVFELSLVLWQFDESGIGCMLYLESLLSFQGLVDV 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium591g00020 143 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 41 135 IPR044523 -
Vium591g00020 143 Pfam YMGG-like Gly-zipper 69 104 IPR027367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium591g00020 Vium-Chr591 140846 141761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium591g00020 40 131 C3H Transcription Factor Family AT5G66070 76.087 4.40e-42 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium591g00020 - - vum:124846328 274.633