Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium591g00014 ATGGGTGTATCAGGGAAGTGGATTAGAGCATTGATTGGTCTAAAGAAATCAGAAAAGCCAGAGTCTTCTCAGAAGGACGGAAATAAGGTTGGCAAGTTACATCATCAACGAAGGCAAGTGGTTGAATTTGATAATGGTAAACTTCCAAACGAATTGGATTGTGAAGCTACTCCACCTATTGGAGATGATAATGTCCATGCAAACCTTGATGCCAATTATTCGTCTTCTGCTTCCCAACAAGCACCTGATGCTGTACATGATCAACAGATGAGGGAGGAATGGGCTGCAATACACATTCAAACAGCGTTTCGAGGATTTTTGGCCAGAAGAGCATTACGAGCCTTGAAAGGTGTGGTAAGGCTTCAGGCCCTAGTAAGAGGCCATGCAGTGAGAAAACAAGCAGCAATAACACTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAAGCTCGTGTTCGGGCAAGGCGTGTTTGCATGGCATTGGAAACTCAAGCATCACAACAGAAACTTCAGCAAAACATTGCAAATGAAGCTCGAGTTCGAGAAATAGAAGAAGGATGGTGTGATAGTGTAGGATCTGTTGAAGATATTCAGGCTAAGATATTGAAGAGACAGGAGGCAGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCTATCTCATCAGTGGCAGGCAGGATCAAGACAACAGCCAGTTTCCTCTGGATTTGAACCAGACAAAAGTAGCTGGGGTTGGAATTGGTTAGAAAGATGGATGGCTGTCCGGCCTTGGGAGAACCGCTTTGTTGACATTAATGTGAAGGATGGGGTAACTGTGCATGAAAATGAAGCTAAGGATGGTAAAAGTGGAACCACACCTCAGTTGACCTCTGCTAACAAGAAACCATTCTCATCAAACACTCATCCAAACCCGGCAAATCATGGAACTGGTCCCACTATTTCTGATGAGTGTGATTCATCACCTAGTAAGTCTGCTGGTTTGCTAGAATCATCAAAAACACAATCCGTTAAGCCAACCTCTAAGGGTAATGTTGAAAATACTGCTGAAGAAGTGAACTCAAAACTTAGAATTGGATCAAGATCTCACAGTAATCCAAAGGAGAGAACAACACAGGTAGATAAGCAGGCAAAAAAACGATTATCTCTGCCTAACAACGGGGGTGGTGCAGGATCTCAAATAGTCAAACACCCGATTAGTGGTACTAACGTGAAAGGGTCGCTAAGCACACAAAAGTCTAGTAGGGATAAGCCTAAGCTCAATGGAAGAAGGGATGTGAATACAAAATCAGATCCATAG 1293 0.4362 MGVSGKWIRALIGLKKSEKPESSQKDGNKVGKLHHQRRQVVEFDNGKLPNELDCEATPPIGDDNVHANLDANYSSSASQQAPDAVHDQQMREEWAAIHIQTAFRGFLARRALRALKGVVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVCMALETQASQQKLQQNIANEARVREIEEGWCDSVGSVEDIQAKILKRQEAAAKRERAMAYALSHQWQAGSRQQPVSSGFEPDKSSWGWNWLERWMAVRPWENRFVDINVKDGVTVHENEAKDGKSGTTPQLTSANKKPFSSNTHPNPANHGTGPTISDECDSSPSKSAGLLESSKTQSVKPTSKGNVENTAEEVNSKLRIGSRSHSNPKERTTQVDKQAKKRLSLPNNGGGAGSQIVKHPISGTNVKGSLSTQKSSRDKPKLNGRRDVNTKSDP 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium591g00014 430 SMART iq_5 114 135 IPR000048 GO:0005515
Vium591g00014 430 SMART iq_5 91 113 IPR000048 GO:0005515
Vium591g00014 430 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Vium591g00014 430 Pfam IQ calmodulin-binding motif 116 133 IPR000048 GO:0005515
Vium591g00014 430 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
Vium591g00014 430 PANTHER IQ-DOMAIN 5-RELATED 1 387 - -
Vium591g00014 430 MobiDBLite consensus disorder prediction 273 430 - -
Vium591g00014 430 MobiDBLite consensus disorder prediction 280 358 - -
Vium591g00014 430 MobiDBLite consensus disorder prediction 359 374 - -
Vium591g00014 430 MobiDBLite consensus disorder prediction 14 37 - -
Vium591g00014 430 Gene3D - 88 145 - -
Vium591g00014 430 FunFam IQ-domain 11 91 142 - -
Vium591g00014 430 MobiDBLite consensus disorder prediction 414 430 - -
Vium591g00014 430 MobiDBLite consensus disorder prediction 394 413 - -
Vium591g00014 430 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium591g00014 Vium-Chr591 76261 82599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium591g00014 1 430 IQD Protein Family AT3G22190 54.943 1.08e-119 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium591g00014 - - gmx:100781346 666.381