Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium591g00013 ATGGGTGTATCAGGGAAGTGGATTAGAGCATTGATTGGTCTAAAGAAATCAGAAAAGCCAGAGTCTTCTCAGAAGGACGGAAATGTTGGCAAGTTACATCATCAACGAAGGCAAGTGGTTGAATTTGATAATGGTAAACTTCCAAACGAATTGGATTGTGAAGCTACTCCACCTATTGGAGATGATAATGTCCATGCAAACCTTGATGCCAATTATTCGTCTTCTGCTTCCCAACAAGCACCTGATGCTGTACATGATCAACAGATGAGGGAGGAATGGGCTGCAATACACATTCAAACAGCGTTTCGAGGATTTTTGGCCAGAAGAGCATTACGAGCCTTGAAAGGTGTGGTAAGGCTTCAGGCCCTAGTAAGAGGCCATGCAGTGAGAAAACAAGCAGCAATAACACTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAAGCTCGTGTTCGGGCAAGGCGTGTTTGCATGGCATTGGAAACTCAAGCATCACAACAGAAACTTCAGCAAAACATTGCAAATGAAGCTCGAGTTCGAGAAATAGAAGAAGGATGGTGTGATAGTGTAGGATCTGTTGAAGATATTCAGGCTAAGATATTGAAGAGACAGGAGGCAGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCTATCTCATCAGTGGCAGGCAGGATCAAGACAACAGCCAGTTTCCTCTGGATTTGAACCAGACAAAAGTAGCTGGGGTTGGAATTGGTTAGAAAGATGGATGGCTGTCCGGCCTTGGGAGAACCGCTTTGTTGACATTAATGTGAAGGATGGGGTAACTGTGCATGAAAATGAAGCTAAGGATGGTAAAAGTGGAACCACACCTCAGTTGACCTCTGCTAACAAGAAACCATTCTCATCAAACACTCATCCAAACCCGGCAAATCATGGAACTGGTCCCACTATTTCTGATGAGTGTGATTCATCACCTAGTAAGTCTGCTGGTTTGCTAGAATCATCAAAAACACAATCCGTTAAGCCAACCTCTAAGGGTAATGTTGAAAATACTGCTGAAGAAGTGAACTCAAAACTTAGAATTGGATCAAGATCTCACAGTAATCCAAAGGAGAGAACAACACAGGTAGATAAGCAGGCAAAAAAACGATTATCTCTGCCTAACAACGGGGGTGGTGCAGGATCTCAAATAGTCAAACACCCGATTAGTGGTACTAACGTGAAAGGGTCGCTAAGCACACAAAAGTCTAGTAGGGATAAGCCTAAGCTCAATGGAAGAAGGGATGTGAATACAAAATCAGATCCATAG 1290 0.4364 MGVSGKWIRALIGLKKSEKPESSQKDGNVGKLHHQRRQVVEFDNGKLPNELDCEATPPIGDDNVHANLDANYSSSASQQAPDAVHDQQMREEWAAIHIQTAFRGFLARRALRALKGVVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVCMALETQASQQKLQQNIANEARVREIEEGWCDSVGSVEDIQAKILKRQEAAAKRERAMAYALSHQWQAGSRQQPVSSGFEPDKSSWGWNWLERWMAVRPWENRFVDINVKDGVTVHENEAKDGKSGTTPQLTSANKKPFSSNTHPNPANHGTGPTISDECDSSPSKSAGLLESSKTQSVKPTSKGNVENTAEEVNSKLRIGSRSHSNPKERTTQVDKQAKKRLSLPNNGGGAGSQIVKHPISGTNVKGSLSTQKSSRDKPKLNGRRDVNTKSDP 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium591g00013 429 PANTHER IQ-DOMAIN 5-RELATED 1 386 - -
Vium591g00013 429 MobiDBLite consensus disorder prediction 47 67 - -
Vium591g00013 429 FunFam IQ-domain 11 90 141 - -
Vium591g00013 429 Pfam IQ calmodulin-binding motif 115 132 IPR000048 GO:0005515
Vium591g00013 429 Pfam IQ calmodulin-binding motif 93 112 IPR000048 GO:0005515
Vium591g00013 429 MobiDBLite consensus disorder prediction 358 373 - -
Vium591g00013 429 ProSiteProfiles IQ motif profile. 115 142 IPR000048 GO:0005515
Vium591g00013 429 MobiDBLite consensus disorder prediction 413 429 - -
Vium591g00013 429 MobiDBLite consensus disorder prediction 393 412 - -
Vium591g00013 429 Gene3D - 90 133 - -
Vium591g00013 429 MobiDBLite consensus disorder prediction 272 429 - -
Vium591g00013 429 ProSiteProfiles IQ motif profile. 91 119 IPR000048 GO:0005515
Vium591g00013 429 SMART iq_5 113 134 IPR000048 GO:0005515
Vium591g00013 429 SMART iq_5 90 112 IPR000048 GO:0005515
Vium591g00013 429 MobiDBLite consensus disorder prediction 279 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium591g00013 Vium-Chr591 76261 82600 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium591g00013 1 429 IQD Protein Family AT3G22190 54.713 2.74e-120 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium591g00013 - - gmx:100781346 671.003