Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium591g00010 ATGGGTGTATCAGGGAAGTGGATTAGAGCATTGATTGGTCTAAAGAAATCAGAAAAGCCAGAGTCTTCTCAGAAGGACGGAAATAAGGTTGGCAAGTTACATCATCAACGAAGGCAAGTGGTTGAATTTGATAATGGTAAACTTCCAAACGAATTGGATTGTGAAGCTACTCCACCTATTGGAGATGATAATGTCCATGCAAACCTTGATGCCAATTATTCGTCTTCTGCTTCCCAACAAGCACCTGATGCTGTACATGATCAACAGATGAGGGAGGAATGGGCTGCAATACACATTCAAACAGCGTTTCGAGGATTTTTGGCCAGAAGAGCATTACGAGCCTTGAAAGGTGTGGTAAGGCTTCAGGCCCTAGTAAGAGGCCATGCAGTGAGAAAACAAGCAGCAATAACACTCCGTTGTATGCAAGCTTTGGTGAGGGTTCAAGCTCGTGTTCGGGCAAGGCGTGTTTGCATGGCATTGGAAACTCAAGCATCACAACAGAAACTTCAGCAAAACATTGCAAATGAAGCTCGAGTTCGAGAAATAGAAGAAGGATGGTGTGATAGTGTAGGATCTGTTGAAGATATTCAGGCTAAGATATTGAAGAGACAGGAGGCAGCAGCAAAACGTGAGAGAGCCATGGCATATGCTCTATCTCATCAGTGGCAGGCAGGATCAAGACAACAGCCAGTTTCCTCTGGATTTGAACCAGACAAAAGTAGCTGGGGTTGGAATTGGTTAGAAAGATGGATGGCTGTCCGGCCTTGGGAGAACCGCTTTGTTGACATTAATGTGAAGGATGGGGTAACTGTGCATGAAAATGAAGCTAAGGATGGTAAAAGTGGAACCACACCTCAGTTGACCTCTGCTAACAAGAAACCATTCTCATCAAACACTCATCCAAACCCGGCAAATCATGGAACTGGTCCCACTATTTCTGATGAGTGTGATTCATCACCTAGTAAGTCTGCTGGTTTGCTAGAATCATCAAAAACACAATCCGTTAAGCCAACCTCTAAGGGTAATGTTGAAAATACTGCTGAAGAAGTGAACTCAAAACTTAGAATTGGATCAAGATCTCACAGTAATCCAAAGGAGAGAACAACACAGGTAGATAAGCAGGCAAAAAAACGATTATCTCTGCCTAACAACGCAGGGGGTGGTGCAGGATCTCAAATAGTCAAACACCCGATTAGTGGTACTAACGTGAAAGGGTCGCTAAGCACACAAAAGTCTAGTAGGGATAAGCCTAAGCTCAATGGAAGAAGGGATGTGAATACAAAATCAGATCCATAG 1296 0.4367 MGVSGKWIRALIGLKKSEKPESSQKDGNKVGKLHHQRRQVVEFDNGKLPNELDCEATPPIGDDNVHANLDANYSSSASQQAPDAVHDQQMREEWAAIHIQTAFRGFLARRALRALKGVVRLQALVRGHAVRKQAAITLRCMQALVRVQARVRARRVCMALETQASQQKLQQNIANEARVREIEEGWCDSVGSVEDIQAKILKRQEAAAKRERAMAYALSHQWQAGSRQQPVSSGFEPDKSSWGWNWLERWMAVRPWENRFVDINVKDGVTVHENEAKDGKSGTTPQLTSANKKPFSSNTHPNPANHGTGPTISDECDSSPSKSAGLLESSKTQSVKPTSKGNVENTAEEVNSKLRIGSRSHSNPKERTTQVDKQAKKRLSLPNNAGGGAGSQIVKHPISGTNVKGSLSTQKSSRDKPKLNGRRDVNTKSDP 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium591g00010 431 MobiDBLite consensus disorder prediction 415 431 - -
Vium591g00010 431 MobiDBLite consensus disorder prediction 395 414 - -
Vium591g00010 431 SMART iq_5 114 135 IPR000048 GO:0005515
Vium591g00010 431 SMART iq_5 91 113 IPR000048 GO:0005515
Vium591g00010 431 ProSiteProfiles IQ motif profile. 116 143 IPR000048 GO:0005515
Vium591g00010 431 Pfam IQ calmodulin-binding motif 116 133 IPR000048 GO:0005515
Vium591g00010 431 Pfam IQ calmodulin-binding motif 94 113 IPR000048 GO:0005515
Vium591g00010 431 Gene3D - 88 145 - -
Vium591g00010 431 MobiDBLite consensus disorder prediction 280 358 - -
Vium591g00010 431 MobiDBLite consensus disorder prediction 359 374 - -
Vium591g00010 431 MobiDBLite consensus disorder prediction 14 37 - -
Vium591g00010 431 FunFam IQ-domain 11 91 142 - -
Vium591g00010 431 PANTHER IQ-DOMAIN 5-RELATED 1 387 - -
Vium591g00010 431 MobiDBLite consensus disorder prediction 273 431 - -
Vium591g00010 431 ProSiteProfiles IQ motif profile. 92 120 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium591g00010 Vium-Chr591 76261 82602 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium591g00010 1 431 IQD Protein Family AT3G22190 54.817 3.88e-118 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium591g00010 - - gmx:100781346 672.544