Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium591g00007 ATGGATTCACCCACGCTCACATCAACAACATCATCAAAAGCATACCCAACATACTCATGCAACACTAACGAGAGGCTTTCGCCAAAGTTCCAATTTTTACGCTCAAAAGGTGCTTCTGCTTCTAATATCGTTCGCCTCGTTAATAGGTGCCCCATAATCCTCGTATCCAGCTTCAAGAACAACGTGATCCCCTCCTTTGAATTGGTGAGAAGGTTCCTTCAATCTGACCAGAAAACCATTGATTGTGTTTTCTGTAGTAGACCTTTCCTTCGATATAACGTTGAAGCGCAGAATGTGGACATGTTGCTTGATGTTGGAGTCAAGGACTCCGGCATCAGCTATTTGTTCAAAGGGAGGCCCTCTATATTCTTGTCTACTAACTTGAGGGAGACTATTGATGAAGTTAAGGAAATGGGGTTCGACCCATCCAAGATAACTTTCGTCATTGCCTTGCACGTCAAATGGGATCTGTCGAAATCGTGGTGGGATACGAAAGTTGATGCCTTTGAGATGTGGGGTTGGTCTGAGGAAATGGTCTGA 540 0.4426 MDSPTLTSTTSSKAYPTYSCNTNERLSPKFQFLRSKGASASNIVRLVNRCPIILVSSFKNNVIPSFELVRRFLQSDQKTIDCVFCSRPFLRYNVEAQNVDMLLDVGVKDSGISYLFKGRPSIFLSTNLRETIDEVKEMGFDPSKITFVIALHVKWDLSKSWWDTKVDAFEMWGWSEEMV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium591g00007 179 Gene3D Transcription termination factor 3, mitochondrial 6 126 IPR038538 -
Vium591g00007 179 SMART mt_12 9 39 IPR003690 GO:0003690|GO:0006355
Vium591g00007 179 SMART mt_12 113 141 IPR003690 GO:0003690|GO:0006355
Vium591g00007 179 SMART mt_12 44 75 IPR003690 GO:0003690|GO:0006355
Vium591g00007 179 PANTHER CGI-12 PROTEIN-RELATED 13 178 IPR003690 GO:0003690|GO:0006355
Vium591g00007 179 Pfam mTERF 14 177 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium591g00007 Vium-Chr591 65041 65949 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vium591g00007 mTERF 1.7e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium591g00007 K15031 - vum:124846308 365.925