Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5868g00001 ATGACGAGAAGCGGTGAGAATGGAGGTCCTTCAAAGAAAGCACTACCTAACTACCATAAACCTCTGCTTATAGGAAACTGGGTAAAGGCTCAGGAATGGGCTGCAGTTCCTGGTAGCCAAGCCACCTACCTTGGCAACCCAGTTCCACGGGGCACACTACCCACCATTATGGTCATTGAATTGCTTGCTATTTCCTTTGTGGAGCAGCAAAGGAGCATGGAGAAAGACCCAGAGAAGAAGAAATACCCTGGTGGTGCTTTTGATCCTTTGGGATACTCCAGGGTCCCTAAAGCATTCCAGAACTTGAAAGGATCTGAGGAGAAAGGAAAATATAGCTTTGGTTAA 345 0.4696 MTRSGENGGPSKKALPNYHKPLLIGNWVKAQEWAAVPGSQATYLGNPVPRGTLPTIMVIELLAISFVEQQRSMEKDPEKKKYPGGAFDPLGYSRVPKAFQNLKGSEEKGKYSFG 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5868g00001 114 Gene3D Chlorophyll a/b binding protein domain 15 108 - -
Vium5868g00001 114 SUPERFAMILY Chlorophyll a-b binding protein 27 106 - -
Vium5868g00001 114 Pfam Chlorophyll A-B binding protein 33 106 IPR022796 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5868g00001 25 112 Chloroplast and Mitochondria Gene Families AT3G54890 77.528 1.08e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5868g00001 K08907 - vum:124841839 238.039