Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5863g00008 ATGCCAGACGTTCAAGCCCTTGTTAATGGATTTGTGAATCTGCTCAAGAAGCGTAAAATTGAAGGGTCTCAGGCCACAGCGAAGCAGACAGCAGAGTTGCTCCGGTCTGTGATATCACAGCAGCGGGTGCCACACACAAACCAGGCCACATCTCTGATTAATGCAGTAAGGGCTGTGGGGGAGAAGATTATTGATGCTAATCCTATTGAGTTATCTGTGGGAAATATCGTGAGGCGGGTTCTTCACATTATAAGGGAGGAGGATCTTTCCCTTGTTACAGATGCTTTGGCTGGTTCTGGAAGTGATGATGAAGATGATGTCGAGCGAGATGATTATCCTGCGTTATCTGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACCTTGCGTCCACCCTCATTACAAACTCTTCTAGAGGATGTGACCGATTCAGCTGCCGTTCCACCAACTCCTTCCTCGACGGGTGACTCTGATGGGAAAAGTAGATCTGTTGAAAAGGGTACAAGAGGTCGGAAGTTGAAGCATGATGTCATTGAAGCAGTCAATGAACTTATTCAAGACATAACCTCTTGCCATGAACAAATAGCAGAACAAGCAGTAGAGCATATTCATCAAAAGTTCGTTTCATCCGAAACTACTCACAGACATGTTTATCTCTTGCTACTTTAA 666 0.4565 MPDVQALVNGFVNLLKKRKIEGSQATAKQTAELLRSVISQQRVPHTNQATSLINAVRAVGEKIIDANPIELSVGNIVRRVLHIIREEDLSLVTDALAGSGSDDEDDVERDDYPALSAAAVAAAARSTLRPPSLQTLLEDVTDSAAVPPTPSSTGDSDGKSRSVEKGTRGRKLKHDVIEAVNELIQDITSCHEQIAEQAVEHIHQKFVSSETTHRHVYLLLL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5863g00008 221 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 2 205 - -
Vium5863g00008 221 Pfam Initiation factor 2 subunit family 19 206 IPR000649 GO:0044237
Vium5863g00008 221 SUPERFAMILY NagB/RpiA/CoA transferase-like 8 206 IPR037171 -
Vium5863g00008 221 MobiDBLite consensus disorder prediction 140 157 - -
Vium5863g00008 221 MobiDBLite consensus disorder prediction 140 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5863g00008 Vium-Chr5863 43787 45990 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5863g00008 1 205 Eukaryotic Initiation Factors Gene Family AT3G07300 68.246 3.20e-81 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5863g00008 K03754 - gmx:100807877 330.872