Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5853g00008 ATGGGAAGCGATGGCGTGAGGAAACCAAGATTATTGTGCCTTCATGGGTTTCGAACAAGCGGAGAAATACTGAAAACGCAGTTACATAAGTGGCCACAATCCGTTCTCGACAACCTTGATCTTGTTTTTGTGGATGCTCCTTTTCCTTGCCAAGGCAAATCCGACGTCGAAGGCATTTTTGATCCTCCTTACTACGAGTGGTTCCAGTTCAACAAGGAATTTACAGAGTACACCAACTTTGACGAGTGCCTTAAGTACATTGAGGACTGCATGATCAAGCACGGACCTATTGATGGGCTTCTGGGTTTCTCACAGGGAGCAATATTATCAGCTGCGCTGCCAGGTCTTCAGGAGAAGGGTGTGGCACTGACGAAGGTTCCCAAGGTGAAATTCGTTGTTATTGTAGGAGGGGCAAAGTTTAGGTCACCGTCTGTAGTGGACAAAGCATATTCTTCTCCCATTAGCTGTCCCTCTCTTCATTTTCTAGGTGAAGTGGATTTTTTGAAACAATATGGAATGGAACTACTAGAATCCTGTGTTGAACCCGTGGTTATTCACCACCCCAAAGGACACACAATACCAAGATTAGATGATAAGAGCGTGAAGACCGTGATGGATTTCATCGAAAGGATTAAGAAAGACGTCTCAAAATAA 654 0.445 MGSDGVRKPRLLCLHGFRTSGEILKTQLHKWPQSVLDNLDLVFVDAPFPCQGKSDVEGIFDPPYYEWFQFNKEFTEYTNFDECLKYIEDCMIKHGPIDGLLGFSQGAILSAALPGLQEKGVALTKVPKVKFVVIVGGAKFRSPSVVDKAYSSPISCPSLHFLGEVDFLKQYGMELLESCVEPVVIHHPKGHTIPRLDDKSVKTVMDFIERIKKDVSK 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5853g00008 217 PANTHER OVARIAN CANCER GENE-2 PROTEIN-RELATED 6 215 - -
Vium5853g00008 217 Gene3D alpha/beta hydrolase 5 215 IPR029058 -
Vium5853g00008 217 Pfam Serine hydrolase (FSH1) 8 199 IPR005645 -
Vium5853g00008 217 SUPERFAMILY alpha/beta-Hydrolases 7 211 IPR029058 -
Vium5853g00008 217 FunFam esterase AGAP003155 5 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5853g00008 Vium-Chr5853 155963 158371 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5853g00008 2 194 Sulfurtransferasese or Rhodanese AT1G09280 29.778 1.61e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5853g00008 - - gmx:100500670 423.705