Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium584g00009 ATGGTGGAAATGGAAGAAGATGAAGACCCAAGGATGAAGAAGGGTTGTTCCCACAGCTCCGAGCTCGCTTCCAAGTGCTCCAATAGAGAGAAATCGTGTTTTGGTGCCCAAAGATATCGACCCATTCGCGTAGCAGATTTTGGACTTGCAAAGCTAGTAGAACGAACCAATGATGAAGAATTCATAGCAACAAGGCTTGTTGGAACACCGGGCTACCTTCCACCAGAATCTGTTAAGGAGCTTCAAGTGACTATAAAAACAGATGTTTTTGCATTTGGGGTGGTTCTGTCAGAGTTGATAACAGGGAAACGTGCACTATTTCGTGACAACCAACAAGCCAACAATATGAAATCACTTGTTACAGTTGTTAGCCAAATTTTCAGAAATAAATACCCAGAGAATGCTTTAGCAGACGCCGTAGATGGGAATCTTCAGCATAGCTATCCCATGGAAGATGTCTACAAGATGGCAGAAGTAGCTCATTGGTGTTTGTGGGAAGATCCAAACGACAGGCCTGTGATGAGGGAGATAGTTGTGGCATTGTCAGAGATTGTTATGTCATCCACAGAATGGGAAGCATCACTAGGTGGAGACAGCCAAGTCTTCAGCGGGGTTCTTGATGGAAGATGA 630 0.4444 MVEMEEDEDPRMKKGCSHSSELASKCSNREKSCFGAQRYRPIRVADFGLAKLVERTNDEEFIATRLVGTPGYLPPESVKELQVTIKTDVFAFGVVLSELITGKRALFRDNQQANNMKSLVTVVSQIFRNKYPENALADAVDGNLQHSYPMEDVYKMAEVAHWCLWEDPNDRPVMREIVVALSEIVMSSTEWEASLGGDSQVFSGVLDGR 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium584g00009 209 Gene3D Transferase(Phosphotransferase) domain 1 12 199 - -
Vium584g00009 209 ProSiteProfiles Protein kinase domain profile. 1 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vium584g00009 209 Pfam Protein kinase domain 42 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vium584g00009 209 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 43 203 IPR044812 GO:0019199|GO:0045087
Vium584g00009 209 SUPERFAMILY Protein kinase-like (PK-like) 42 181 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium584g00009 Vium-Chr584 89472 95435 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium584g00009 43 209 Receptor kinase-like Gene Family AT1G51940 41.379 1.91e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vium584g00009 Pkinase 1.9e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium584g00009 - - vum:124846176 421.394