Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5846g00002 ATGGAACCGGAATCCGGAACTTCCGCTTCTCGGAATCCTTCTCAGTTGTCCTGGGTGAATCTCTCTCGGAATCTAATATTAGCATATCAAAGCTTTGGTGTGGTGTACGGGGATCTGAGCACTTCACCTCTCTATGTGTTCACGAGCGCGTTCAGGGGAAAGTTACTGGATCACTATGATGAAGAAACAATATTTGGCACTTTTTCGTTGATTTTTTGGACCCTTACTCTGATTCCGTTGCTTAAATATGTATTCATCTTATTGAGTGCTGATGACAACGGGGAAGGTGGAACATTTGCTCTTTATTCTCTGCTCTGCAGACATGCCAAGTTTAACTTACTCCCCAATCAACAAGCAGCTGATGAGGAGCTATCATCCTATAAATATGGCCCATCTTCACAGGCTGCAGCCTCTTCTCCATTGAAGAGGTTTCTAGAGAAACATAAAAGGTTAAGAACAGCCCTGCTTGTTGTGGTACTGTTTGGTGCTTGCATGGTCATTGGTGATGGTGTGCTTACTCCAGCAATTTCAGTTCTAGCATCTGTATCAGGATTAAAAGTGACAGAAAAGAAATTAACAGATGGTGAACTTGTCCTGCTTGCCTGTGTCATATTGGTTGGACTGTTTGCTCTCCAACATTGTGGCACGCACAAAGTAGCATTTATGTTTGCTCCAATTGTAATCATCTGGCTTGTATCAATATTTTCTGTTGGGCTGTATAATACAATTCATTGGAATCCACAAATAGTCCGTGCTATATCACCGTATTATATCATAAAGTTTTTTAGCAAGACTGGTAAAGAAGGTTGGGTTTCTCTTGGAGGGATACTTCTCTGTATCACTGGAACTGAAGCTATGTATGCAGATCTTGGTCATTTCACTGCTTCGTCAATAAGGCTTGCATTTGCGTTTGTTATATACCCATGTTTGGTAGTACAGTACATGGGCCAAGCTGCTTTCCTGTCTAAAAACCTCAACTCTGTTGATAACAGTTTTTATGACTCTATACCTGAACCTGTATTTTGGCCTGTTTTTGTTATTGCCACCCTTGCTGCAATTGTTGGGAGTCAAGCTGTTATAACTGCAACTTTCTCAATCATCAAGCAGTGTCATGCACTTGGCTGCTTTCCCCGAGTTAAAGTTGTACACACCTCAAAACATATATATGGACAGATCTATATCCCAGAAATCAATTGGATACTTATGATCTTAACTCTTGCTATAACCATTGGATTTCAGGACACAACCATAATTGGAAATGCATATGGACTTGCGTGTATGACAGTTATGTTTGTAACTACATTTCTGATGACACTAGTCGCAATCTTTGTCTGGCAGAAAAGTGTATTCATTGCTATAGCATTTCTTTTATTCTTTTGGGTGATAGAGGGAGTATATCTATCAGCAGCATTCATCAAAGTGCCTCAGGGAGGATGGGTTCCTCTTGTCTTATCGTTCTTCTTCATGGCTGTTATGTACGTGTGGCATTATGGAACTCGTCGGAAGTACAGCTATGATCTGCACAACAAAGTTTCATTGAAATGGTTACTGGGCTTGGGTCCGAGCCTTGGCATTGTTCGTGTCCCAGGGATTGGTCTCATCTACACTGAACTAGCTACCGGAATACCTGCTATATTTTCCCATTTTGTAACTAACCTTCCTGCATTTCACAGGGTTCTAGTTTTTGTTTGTGTAAAATCAGTTCCTGTTCCATATGTTTCACCTGAAGAACGTTTCCTTATCGGGCGAGTTTGTCCCAGACCTTATCGAATGTATAGGTGTATTGTCAGATATGGTTACAAGGACATTCAAAGGGATGATGGAGATTTTGAGAATCATCTTATACAGAGTATAGCAGAATTTATCCAAATGGAAGCAGTGGAACCCCAGTTTTCAAGTTCTGAAGCTTCTTCACTTGATGGGAGGATGGCTGTTATAAGTTCTAGAAACTTAGAATATGCTTCAAGTTTAATTGTTTCAGAGCAAGAGGATATTGGCGTGGACATATCCATCCCTAGCAGCAGATCTGTAACCCTAAGAAGTTTGCAATCGGTCTATGATGATGAAAGCCCACAAGTTAGAAGGCGACGAGTAAGATTTCAGCTACCAGAAAATCCTGGCATGAATCCAGATGTCAAGGAAGAGCTTTTGGATTTAATTCAAGCCAAGGACGCTGGGGTTGCATATATCATGGGGCACTCGTATGTGAAGGCTAGGAAATCATCCTCATTCCTGAAAAAACTTGTGATTGATATTGGCTACTCATTTCTGCGGAAGAATTGCAGGGGTCCAGCTGTAGCTCTTAACATTCCTCACATTAGTCTTATCGAAGTTGGAATGATATATTATGTGTAG 2355 0.4098 MEPESGTSASRNPSQLSWVNLSRNLILAYQSFGVVYGDLSTSPLYVFTSAFRGKLLDHYDEETIFGTFSLIFWTLTLIPLLKYVFILLSADDNGEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSSQAAASSPLKRFLEKHKRLRTALLVVVLFGACMVIGDGVLTPAISVLASVSGLKVTEKKLTDGELVLLACVILVGLFALQHCGTHKVAFMFAPIVIIWLVSIFSVGLYNTIHWNPQIVRAISPYYIIKFFSKTGKEGWVSLGGILLCITGTEAMYADLGHFTASSIRLAFAFVIYPCLVVQYMGQAAFLSKNLNSVDNSFYDSIPEPVFWPVFVIATLAAIVGSQAVITATFSIIKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAITIGFQDTTIIGNAYGLACMTVMFVTTFLMTLVAIFVWQKSVFIAIAFLLFFWVIEGVYLSAAFIKVPQGGWVPLVLSFFFMAVMYVWHYGTRRKYSYDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYTELATGIPAIFSHFVTNLPAFHRVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENHLIQSIAEFIQMEAVEPQFSSSEASSLDGRMAVISSRNLEYASSLIVSEQEDIGVDISIPSSRSVTLRSLQSVYDDESPQVRRRRVRFQLPENPGMNPDVKEELLDLIQAKDAGVAYIMGHSYVKARKSSSFLKKLVIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5846g00002 784 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 23 783 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium5846g00002 784 Pfam K+ potassium transporter 29 602 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium5846g00002 784 NCBIfam potassium uptake protein 27 784 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5846g00002 Vium-Chr5846 4412 9197 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5846g00002 1 784 Inorganic Solute Cotransporters AT3G02050 78.834 0.0 1244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5846g00002 K03549 - gmx:100790329 1490.71