Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5846g00001 ATGGAACCGGAATCCGGAACTTCCGCTTCTCGGAATCCTTCTCAGTTGTCCTGGGTGAATCTCTCTCGGAATCTAATATTAGCATATCAAAGCTTTGGTGTGGTGTACGGGGATCTGAGCACTTCACCTCTCTATGTGTTCACGAGCGCGTTCAGGGGAAAGTTACTGGATCACTATGATGAAGAAACAATATTTGGCACTTTTTCGTTGATTTTTTGGACCCTTACTCTGATTCCGTTGCTTAAATATGTATTCATCTTATTGAGTGCTGATGACAACGGGGAAGGTGGAACATTTGCTCTTTATTCTCTGCTCTGCAGACATGCCAAGTTTAACTTACTCCCCAATCAACAAGCAGCTGATGAGGAGCTATCATCCTATAAATATGGCCCATCTTCACAGGCTGCAGCCTCTTCTCCATTGAAGAGGTTTCTAGAGAAACATAAAAGGTTAAGAACAGCCCTGCTTGTTGTGGTACTGTTTGGTGCTTGCATGGTCATTGGTGATGGTGTGCTTACTCCAGCAATTTCAGTTCTAGCATCTGTATCAGGATTAAAAGTGACAGAAAAGAAATTAACAGATGGTGAACTTGTCCTGCTTGCCTGTGTCATATTGGTTGGACTGTTTGCTCTCCAACATTGTGGCACGCACAAAGTAGCATTTATGTTTGCTCCAATTGTAATCATCTGGCTTGTATCAATATTTTCTGTTGGGCTGTATAATACAATTCATTGGAATCCACAAATAGTCCGTGCTATATCACCGTATTATATCATAAAGTTTTTTAGCAAGACTGGTAAAGAAGGTTGGGTTTCTCTTGGAGGGATACTTCTCTGTATCACTGGAACTGAAGCTATGTATGCAGATCTTGGTCATTTCACTGCTTCGTCAATAAGGCTTGCATTTGCGTTTGTTATATACCCATGTTTGGTAGTACAGTACATGGGCCAAGCTGCTTTCCTGTCTAAAAACCTCAACTCTGTTGATAACAGTTTTTATGACTCTATACCTGAACCTGTATTTTGGCCTGTTTTTGTTATTGCCACCCTTGCTGCAATTGTTGGGAGTCAAGCTGTTATAACTGCAACTTTCTCAATCATCAAGCAGTGTCATGCACTTGGCTGCTTTCCCCGAGTTAAAGTTGTACACACCTCAAAACATATATATGGACAGATCTATATCCCAGAAATCAATTGGATACTTATGATCTTAACTCTTGCTATAACCATTGGATTTCAGGACACAACCATAATTGGAAATGCATATGGACTTGCGTGTATGACAGTTATGTTTGTAACTACATTTCTGATGACACTAGTCGCAATCTTTGTCTGGCAGAAAAGTGTATTCATTGCTATAGCATTTCTTTTATTCTTTTGGGTGATAGAGGGAGTATATCTATCAGCAGCATTCATCAAAGTGCCTCAGGGAGGATGGGTTCCTGTTCCATATGTTTCACCTGAAGAACGTTTCCTTATCGGGCGAGTTTGTCCCAGACCTTATCGAATGTATAGGTGTATTGTCAGATATGGTTACAAGGACATTCAAAGGGATGATGGAGATTTTGAGAATCATCTTATACAGAGTATAGCAGAATTTATCCAAATGGAAGCAGTGGAACCCCAGTTTTCAAGTTCTGAAGCTTCTTCACTTGATGGGAGGATGGCTGTTATAAGTTCTAGAAACTTAGAATATGCTTCAAGTTTAATTGTTTCAGAGCAAGAGGATATTGGCGTGGACATATCCATCCCTAGCAGCAGATCTGTAACCCTAAGAAGTTTGCAATCGGTCTATGATGATGAAAGCCCACAAGTTAGAAGGCGACGAGTAAGATTTCAGCTACCAGAAAATCCTGGCATGAATCCAGATGTCAAGGAAGAGCTTTTGGATTTAATTCAAGCCAAGGACGCTGGGGTTGCATATATCATGGGGCACTCGTATGTGAAGGCTAGGAAATCATCCTCATTCCTGAAAAAACTTGTGATTGATATTGGCTACTCATTTCTGCGGAAGAATTGCAGGGGTCCAGCTGTAGCTCTTAACATTCCTCACATTAGTCTTATCGAAGTTGGAATGATATATTATGTGTAG 2091 0.4075 MEPESGTSASRNPSQLSWVNLSRNLILAYQSFGVVYGDLSTSPLYVFTSAFRGKLLDHYDEETIFGTFSLIFWTLTLIPLLKYVFILLSADDNGEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSSQAAASSPLKRFLEKHKRLRTALLVVVLFGACMVIGDGVLTPAISVLASVSGLKVTEKKLTDGELVLLACVILVGLFALQHCGTHKVAFMFAPIVIIWLVSIFSVGLYNTIHWNPQIVRAISPYYIIKFFSKTGKEGWVSLGGILLCITGTEAMYADLGHFTASSIRLAFAFVIYPCLVVQYMGQAAFLSKNLNSVDNSFYDSIPEPVFWPVFVIATLAAIVGSQAVITATFSIIKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAITIGFQDTTIIGNAYGLACMTVMFVTTFLMTLVAIFVWQKSVFIAIAFLLFFWVIEGVYLSAAFIKVPQGGWVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENHLIQSIAEFIQMEAVEPQFSSSEASSLDGRMAVISSRNLEYASSLIVSEQEDIGVDISIPSSRSVTLRSLQSVYDDESPQVRRRRVRFQLPENPGMNPDVKEELLDLIQAKDAGVAYIMGHSYVKARKSSSFLKKLVIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5846g00001 696 NCBIfam potassium uptake protein 27 482 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium5846g00001 696 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 23 482 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium5846g00001 696 Pfam K+ potassium transporter 29 482 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5846g00001 Vium-Chr5846 4412 9199 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5846g00001 481 696 Inorganic Solute Cotransporters AT3G02050 75.000 5.98e-103 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5846g00001 K03549 - gmx:100790329 917.916