Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5807g00005 ATGAATACTGCCGATCGTGATTCTCACCAGCGGAAGAGGTTCAAGGAGCTTCTGATACTGGTGGACACTTGCCAAGCCTCTACTCTGTTCTTCCAGAACCGGTGCGTGAACTTGTTCCATGCTGAAATTGGAGAAGATGGAAATGTTGTTGGAGTAAGAACTATTGGCTCATCAGAAGTTATGATGTTGGCAGGACTTGCATTCAAGAAGTGGCAGAAGAAGCATAAGGCAAAGAGACTTGAGGCATCAAACCTATCTTTGGTGCTACATCTTGGATTGAGGAAACCATGGCCTTGA 297 0.4545 MNTADRDSHQRKRFKELLILVDTCQASTLFFQNRCVNLFHAEIGEDGNVVGVRTIGSSEVMMLAGLAFKKWQKKHKAKRLEASNLSLVLHLGLRKPWP 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5807g00005 98 PANTHER GLUTAMATE DECARBOXYLASE 29 88 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5807g00005 Vium-Chr5807 39047 41727 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5807g00005 28 97 Calmodulin-binding Proteins AT3G17760 48.000 5.59e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5807g00005 K05290 K01580 vum:124841728 183.726