Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5807g00004 ATGAATACTGCCGATCGTGATTCTCACCAGCGGAAGAGGTTCAAGGAGCTTCTGATACTGGTGGACACTTGCCAAGCCTCTACTCTGTTCTTCCAGATGAACATATCGATAATGGAGAACTTGGGCAAAATGAACCGGTGCGTGAACTTGTTCCATGCTGAAATTGGAGAAGATGGAAATGTTGTTGGAGTAAGAACTATTGGCTCATCAGAAGTTATGATGTTGGCAGGACTTGCATTCAAGAAGTGGCAGAAGAAGCATAAGGCAAAGAGACTTGAGGCATCAAACCTATCTTTGGTGCTACATCTTGGATTGAGGAAACCATGGCCTTGA 333 0.4444 MNTADRDSHQRKRFKELLILVDTCQASTLFFQMNISIMENLGKMNRCVNLFHAEIGEDGNVVGVRTIGSSEVMMLAGLAFKKWQKKHKAKRLEASNLSLVLHLGLRKPWP 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5807g00004 110 PANTHER GLUTAMATE DECARBOXYLASE 45 100 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5807g00004 Vium-Chr5807 39046 41728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5807g00004 45 109 Calmodulin-binding Proteins AT3G17760 48.571 6.24e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5807g00004 K05290 - vum:124841728 215.312