Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5795g00001 ATGGAAGAAAAATCTTCGTTAAAAAATTTGCTGAAAGATGAAGAAAGGCCTTACGATTGTAATACAACAGGAAACGGAACCGATGAACCCTTCCTTCATAAAACTATGGGATCCAGTGTTCTCTCCTTGAACCTGAATAACTCTGGACAGCCCTTGAACCAAATGGGCATGCTGAGAATCAAGCTTGAAGAAGCTAAGAAAGAGAATGAAATCCTAAAGAACATGCTAACCAAGGTTAATGAACACTGCACTGTTCTTCAGAATCGAATACTTTTTGAGATGCAGCAACATCAACTATCTTCATCAGTTATCAATAAAAACAATAATCATGAGTCGCAGGGAAAAATACAAGATGTGGAGAAACCAATGCTACACACTCGGCAGTTTTTGAATATTGGTGACTGTTCTTCACTTTCAGAGGGTTATACAGAAAAGGTTGAAAAGAAAACATTAGACAGAAGCCTGGCATGTGAGAAAAAGAATATTGTTGAAGGTGAAATGAACACAAAAATAGCATTGCATGAAGCAAAATGCATAGAAGATCAAGCATCTGAGGTTACTTGCAGAAGAGCTAAAGTATCCATAAGAGCACGATCAGATTTTTCTTTGGTAAGAATTTGTATCTCATTTGGTAACTATTGTGTTATTATGGCTTTCTATAGGACTTGA 669 0.3662 MEEKSSLKNLLKDEERPYDCNTTGNGTDEPFLHKTMGSSVLSLNLNNSGQPLNQMGMLRIKLEEAKKENEILKNMLTKVNEHCTVLQNRILFEMQQHQLSSSVINKNNNHESQGKIQDVEKPMLHTRQFLNIGDCSSLSEGYTEKVEKKTLDRSLACEKKNIVEGEMNTKIALHEAKCIEDQASEVTCRRAKVSIRARSDFSLVRICISFGNYCVIMAFYRT 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5795g00001 222 Coils Coil 55 82 - -
Vium5795g00001 222 MobiDBLite consensus disorder prediction 1 19 - -
Vium5795g00001 222 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5795g00001 Vium-Chr5795 830 2471 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5795g00001 53 221 WRKY Transcription Factor Family AT1G62300 24.615 4.76e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5795g00001 - - vum:124841697 442.965