Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium577g00003 ATGTCCTCCCACCGCGCGTTCCAGCTTAAACTTAATCCGTTAACAGGTAACTCTGAATGGATCGTCATTGAAGACAATGACGAGAGCTTCGCTCAGAATTTCCACAAGCCTTTCCTTGCCACGACGTCGTATTTGGACATGCTTAATGACTCCACCAGAAACGCGGCATTTCGCCACGCCATTGAGAAAACCATCAGCAAACCTTGCCATGTCCTCGATATCGGTGCTGGAACTGGGTTGCTTTCGATGATGGCTGCACGTGCCATGGGTGACGAAGGGAAGGTCACAGCTTGTGAATCTTACCTTCCCATGGTGAAGCTGATGAAGAAGGTGTTGCGCCTTAATGGCATGGAGGGAAGAGTCAAAATCATCAACAAGCGCTCTGAGGAACTCCAAGTTGGTCTTGATATGCCTTCGCGAGCACATGTTCTTGTAAGCGAGATACTTGATTCAGAGCTACTGGGTGAGGGGCTTATACCGACCCTACAACATGCACATGACAATTTGTTGGTGGAAAATGCCATGACTGTGCCATATCGAGCAACTATATATGGACAGCTGGTTGAAAGCACATTCTTATGGAAGTTGCATGATTTTCATAACAACGAGGCTACTGTATCTGATAGCATTCGGCTTACTCCTCCAGGACTTGATTGTGTGCTAGGTATCAAACGTCAGCAATATGCTATGCATGTCAATCCTTTACAGGAAGAAATAACATTGCTTTCAGAACCCTTCAAAATTTTTGAATTTGATTTTTGGAAACGGCCAGAGAGTTATGGCGAAACTGAGTTGTGTGTAAAGGCAACGAATGATGGGAGAGTTCATGTTGTGGTCTCTTGGTGGGTACTTCAACTTGATCAGGAAGGGACTATCTATTATTCCACTGCTCCAAGGTGGATAAGCTCACCGACAATTACAAGTCCTATTGGTTGGTGTGACCACTGGAAACAGTGTGTTTGGTTCGTTCCAGGCAGTGGTATTTCCATACTCCAAGGGGAAGAAATTCGTTTACTTGCTACTCATACTGAAACTAGTTTCTCATATAATTTTGATACCCTAGTACCAACTACTGAGATTTTGAACCATAGGTGCATGACAGGAGATTTTCAGCTTGTACTACCACCAGAAAGAGCTGCAATTTATGCAGATAAAGAATGGAGGCTTTCAATGTTGAAAGCAGTACAAAGCATGGGAAAAGATCGCCTGTTATGCTTGGTTGTAGATGATAGTGTCTTTTTACCACTTCTTGTAGCAAAGCTTTCCGAAGCAAGTGTAATGTCATTACTTCCTGGATTGAGGGAAAGGGGCCTCCAATACCTGCAAGCAGTTGCCCATGCAAATGGTTTGTCACATAGTTGCATTGAAGTTCTTGAAAAAAACGTGCAACAGTTAAACATGCATGATATACATCAGAAAAAGGTTGATCTGTTAATAGCTGAACCTTTCTATGTAGGACACGATGGTATGCTGCCATGGCAGAACCTACGATTTTGGAGGGATCGTACTACACTTAATGATATACTCTCAGAAGATGCTCTGACAATTCCTAGTAAAGGAATATTGAGAGCATGCGCTATGTCTCTTCCTGATCTTTGGAAAAGTCGTTGTTGCCTGAGTAGTATTGAAGGTTTTGACCATTCAGTGGTAAATGCTACATTGGGGGCCTGCGGTCATCTACCAGAACTAGAAGACGGTCCCTGTCTCCCTTTTTTCGTCTGGCAGTGTGGAGAATTTGATGTGCTTAGTGAGACATTTGACGTGATGGAGTTTGAGTTTTCAAAACAAATATGCGAATGTCAAGGAAAATCCCAGGTTAAGTTCACCAAGAGGGGGGTATGTCATGGATTTGTATTATGGATTGACTGGGTCATGGATTTACAAAATTCTATTGTGATTTCAACTGGTCCAGATAGGAAGTACTGGAAGCAGGGAGTTAAGCTTCTTGGAACACCTAGAACAGTAGACCCTCAAAGCTTGACAAGTGTCCAACCTTGTTCTGCAGTTGTCGAAGCTTGTTTTAGCCCATTAAAGGGGGAACTCAAAATTATACTTGATTTTTTATGA 2067 0.4306 MSSHRAFQLKLNPLTGNSEWIVIEDNDESFAQNFHKPFLATTSYLDMLNDSTRNAAFRHAIEKTISKPCHVLDIGAGTGLLSMMAARAMGDEGKVTACESYLPMVKLMKKVLRLNGMEGRVKIINKRSEELQVGLDMPSRAHVLVSEILDSELLGEGLIPTLQHAHDNLLVENAMTVPYRATIYGQLVESTFLWKLHDFHNNEATVSDSIRLTPPGLDCVLGIKRQQYAMHVNPLQEEITLLSEPFKIFEFDFWKRPESYGETELCVKATNDGRVHVVVSWWVLQLDQEGTIYYSTAPRWISSPTITSPIGWCDHWKQCVWFVPGSGISILQGEEIRLLATHTETSFSYNFDTLVPTTEILNHRCMTGDFQLVLPPERAAIYADKEWRLSMLKAVQSMGKDRLLCLVVDDSVFLPLLVAKLSEASVMSLLPGLRERGLQYLQAVAHANGLSHSCIEVLEKNVQQLNMHDIHQKKVDLLIAEPFYVGHDGMLPWQNLRFWRDRTTLNDILSEDALTIPSKGILRACAMSLPDLWKSRCCLSSIEGFDHSVVNATLGACGHLPELEDGPCLPFFVWQCGEFDVLSETFDVMEFEFSKQICECQGKSQVKFTKRGVCHGFVLWIDWVMDLQNSIVISTGPDRKYWKQGVKLLGTPRTVDPQSLTSVQPCSAVVEACFSPLKGELKIILDFL 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium577g00003 688 FunFam Protein arginine N-methyltransferase 1.6 521 687 - -
Vium577g00003 688 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 438 661 IPR029063 -
Vium577g00003 688 PIRSF Arg_N-mtase 4 683 IPR014644 GO:0006479|GO:0008168
Vium577g00003 688 Pfam Lysine methyltransferase 22 125 IPR019410 -
Vium577g00003 688 Gene3D Vaccinia Virus protein VP39 38 179 IPR029063 -
Vium577g00003 688 Gene3D Vaccinia Virus protein VP39 371 517 IPR029063 -
Vium577g00003 688 FunFam Protein arginine N-methyltransferase 7 370 517 - -
Vium577g00003 688 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 44 366 IPR029063 -
Vium577g00003 688 Gene3D - 521 687 - -
Vium577g00003 688 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 23 352 IPR025799 GO:0016274|GO:0018216
Vium577g00003 688 Gene3D - 180 365 - -
Vium577g00003 688 FunFam Protein arginine N-methyltransferase 1.6 180 365 - -
Vium577g00003 688 CDD AdoMet_MTases 71 132 - -
Vium577g00003 688 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 358 688 IPR025799 GO:0016274|GO:0018216
Vium577g00003 688 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 439 657 IPR025799 GO:0016274|GO:0018216
Vium577g00003 688 FunFam Protein arginine N-methyltransferase 37 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium577g00003 Vium-Chr577 8616 15619 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium577g00003 22 184 C2H2 Transcription Factor Family AT3G12270 27.907 1.91e-11 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium577g00003 K11438 - gmx:100785846 1239.94