Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5763g00003 ATGAATCTTTTATTCGGTGCTGTAGTTCTCCTCGTTTTCTTCGCGGTGAAATTTCTCTACGCAAATGTGTGGGTTCCCCGGCGAACGGAGCGTCACTTCAAGAAGCAAGGGATAGGAGGCCCTGGCTACTGTCCGATCGTGGGGAACTCGTCGGAGATCCGACGGCTGTACGCGGAAGCGAAGTCAGAGGCGACCCCTGCGTTCGAGCATGATAACATCTTGAGGCGCGTGGTTCCATTTTACGAAAGGTGGTCTCGCGCGCACGGGAAAACTTTCCTGTACTGGTTCGGTTCAACACCCCGGTTGGCGATAACTGAACCGGACATGATTAAGGAGGTGCTGACGAATACGCGCGGTGAGTACGGGAAAGTTCCGTACAACCCTCAGTCGAAGTTGCTGTTTGGACAGGGCCTTGTAGGCCTGGAAGGTGAACAATGGGCTTTGCACAGAAGGATTATAAATCTGGCCTTTAACTTGGAGCTGGTTAAGGGATGGGTGCCAGATATTGTGGCAAGCGTGACAAAGATGGTGGAGAAATGGGAAGACCAAAGAGGAGGAAAAGATGAATTTGAGATAGAAGTGCACAGAGAGCTTCATGATCTTTCTGCTGATGTTATATCAAGAACTGCTTTTGGCAGCAGTTATGAAGAGGGAAAGCATATTTTCAACTTACAGGAGCAACAAATGCACCTTTTTTCACAGGCTATTAGAAGTGTCTATATCCCTGGATTCAGGTTTTTGCCAACTAGGAAGAACAGGGAGAGGCGGAGACTAGAAAAAGAAACACGTGAATCAATTCTGAAGCTTATTGAGACCAAGAGCAACACGGGAGAAAATGCAAGAAATGTACTAAGTTCTTTGATGTGTTCCTACAAGAATGAGGTTGGTGGAGAAGAAAAGTTAAGGGTGGAAGAAATTATAGATGAATGTAAAACCATCTACTTTGCTGGGAAGGAAACTACAGCTAACTTGTTAACTTGGACACTTCTTCTATTAGCAAAACATCAGGAATGGCAAAGTAAGGCACGTGAAGAAGTTCTTCGTGTTATTAAACACAATCAACTTCCTGTTGCGGACAATTTAAGCGACCTTAAGATTGTTAGCATGATAATTAACGAAACACTTCGGCTCTATCCTCCAGCAGTGATGCTAATGAGGCAAGCCTCTAAAGATGTGATGCTTGGAAGCATTAATGTTCCTGCTAAGACTCAACTCTATTTGGCATTGACTGCTGTTCATCATGACAGAGAAATCTGGGGTGAAGATTGCCATAACTTCAATCCAACAAGATTTAGCGAGCCTCGTAAACATTTAGCTGCATTCATTCCTTTTGGATTAGGCCCTCGAACTTGTGTTGGGCAAAATTTGGCAATGGTTGAGGCAAAGATTGCTCTTTCTTTGATCATTCAAAGTTACAGTTTTGTGCTATCTCCAAACTATGTTCATGCTCCTGTACTTTTTATCACTTTGCAGCCTCAGTGTGGGGCGCAAATCATTTTCAGAAGGATTTCATATTGA 1518 0.4427 MNLLFGAVVLLVFFAVKFLYANVWVPRRTERHFKKQGIGGPGYCPIVGNSSEIRRLYAEAKSEATPAFEHDNILRRVVPFYERWSRAHGKTFLYWFGSTPRLAITEPDMIKEVLTNTRGEYGKVPYNPQSKLLFGQGLVGLEGEQWALHRRIINLAFNLELVKGWVPDIVASVTKMVEKWEDQRGGKDEFEIEVHRELHDLSADVISRTAFGSSYEEGKHIFNLQEQQMHLFSQAIRSVYIPGFRFLPTRKNRERRRLEKETRESILKLIETKSNTGENARNVLSSLMCSYKNEVGGEEKLRVEEIIDECKTIYFAGKETTANLLTWTLLLLAKHQEWQSKAREEVLRVIKHNQLPVADNLSDLKIVSMIINETLRLYPPAVMLMRQASKDVMLGSINVPAKTQLYLALTAVHHDREIWGEDCHNFNPTRFSEPRKHLAAFIPFGLGPRTCVGQNLAMVEAKIALSLIIQSYSFVLSPNYVHAPVLFITLQPQCGAQIIFRRISY 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5763g00003 505 Gene3D Cytochrome P450 23 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5763g00003 505 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5763g00003 505 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5763g00003 505 PRINTS E-class P450 group I signature 441 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5763g00003 505 PRINTS E-class P450 group I signature 451 474 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5763g00003 505 PRINTS E-class P450 group I signature 85 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5763g00003 505 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5763g00003 505 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5763g00003 505 PRINTS P450 superfamily signature 442 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5763g00003 505 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5763g00003 505 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5763g00003 505 PANTHER CYTOCHROME P450 FAMILY MEMBER 16 495 - -
Vium5763g00003 505 SUPERFAMILY Cytochrome P450 35 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5763g00003 505 Pfam Cytochrome P450 81 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5763g00003 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 444 453 IPR017972 GO:0005506|GO:0016705
Vium5763g00003 505 FunFam Cytochrome P450 734A1 23 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5763g00003 Vium-Chr5763 20044 27978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5763g00003 20 504 Cytochrome P450 AT1G75130 56.584 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5763g00003 - - gmx:100775195 865.144