Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5740g00001 ATGAACCTTTTACTCCCTCAACACCACCACCTTTCATTCTCCCAATGCCCCTTTTTCCACAACCCCATCAAAACCCTCCAATTTCTTCCCAATCCTCCCGCACGTGCGAGCACCGTAATCCGCATGGGTGGGGGTCCCCGCACGTACCCGGGTGGCGTGTCGAAGTGGGTGTGGAAACGGATGCAGGCGAAGAAGGCGAAGCAGCTACTGAAGGCGCGTCTGTCCAGGGAGCGGCAGATATACGAGATGAGGAAGCGGGCGGAGCTGAAGGCGGCGGTGTCGGAGCTGGAGAGGCCGTGGGAGGTGGTGGATAGGGCGGCGGCGGCGGCACCCAATCTGTTCTCTGTTGGGGCTGATGAGCAGGTGAAGGTTCTTGCCGACAGGTTTCAGAGGCCTGGTGGGTTTGATATGTGGAGTGAGAAGGATGGGCCTGTGTTGTTTGAGACCCCTGATGAGTTGCCATCTGCTAGGTTTTTCCCCAAAGGGGTGGTGCACAGTGTGAAGCCTTATAGGAGGGTTGATGGGTATGGGCTGGTGAAGGAGGGGTATGATGAGGAACGAGGGGGTTTGGTAAAGGGGGATGCTTTTGATGATAAGTTGAGTGAGAAGGAAAATGGGGGAAAGGAGATTGAATTTGGCGGAAAGTTGAATGAAAAGGGGAATTGGGGGAAGAAATTTGAATTTGATGAAGGTTTGAGTGAAATGGGAAATGGGAGGAAAGGGGTTGTGTATGGTGGGGATTTGAGTGGAAATGGGAATGGAAAAGGGGTTTTGTTGGAGGATGTTGATGGAGAAATTTCATCTTTTAATGTGAATTATGGGAGAAATGGAGTTGAGGGTGAGGGTGAGGGTGAGGTTGGTTTGAGAAGGAATGGGAATAGGAGGAGGCTTTTGTCTGATAATGTTGGTAGAAATGGAGTGCAGTCTCATGGGAGGAAGGGAGTGGAGGGTGATGGTAGATTGAGAAGAAATGGAAATGGAAGGAGGGTTTTGTCTGATGATGTTGGTAGGTCTAACAATGGAGGGCGATCTTCTCGTTTGAATTATGAGAGGAATGCAAATGGAAGGTTTGATGGTGGAGAGCATTCTCCTCCCTCTTCAAATTTTGAGAGGAATGAAACAAGTTTTGATGGCAGGTTGAGGAGGAGCAGGGGTAATGGAAGGAGGGTTTTCTCCAAGGATGTTGTTGATGGATCTAATGAGGGAGTTGGTTCTGTCAGGAAACAGAGAGGGGGCAATTCCATTAGAGGCAGAAGTGGAGGAAAGTTTGCTAACAGGACTTTAGAGTATGCTTCACCAAGAGGAAGAGGTAGTAGAGGTGCAAATTCTGAAGTTTATGACATGGGTTTGCAACAAGATGGG 1362 0.4971 MNLLLPQHHHLSFSQCPFFHNPIKTLQFLPNPPARASTVIRMGGGPRTYPGGVSKWVWKRMQAKKAKQLLKARLSRERQIYEMRKRAELKAAVSELERPWEVVDRAAAAAPNLFSVGADEQVKVLADRFQRPGGFDMWSEKDGPVLFETPDELPSARFFPKGVVHSVKPYRRVDGYGLVKEGYDEERGGLVKGDAFDDKLSEKENGGKEIEFGGKLNEKGNWGKKFEFDEGLSEMGNGRKGVVYGGDLSGNGNGKGVLLEDVDGEISSFNVNYGRNGVEGEGEGEVGLRRNGNRRRLLSDNVGRNGVQSHGRKGVEGDGRLRRNGNGRRVLSDDVGRSNNGGRSSRLNYERNANGRFDGGEHSPPSSNFERNETSFDGRLRRSRGNGRRVFSKDVVDGSNEGVGSVRKQRGGNSIRGRSGGKFANRTLEYASPRGRGSRGANSEVYDMGLQQDG 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5740g00001 454 PANTHER OS02G0564300 PROTEIN 6 454 - -
Vium5740g00001 454 MobiDBLite consensus disorder prediction 311 330 - -
Vium5740g00001 454 MobiDBLite consensus disorder prediction 337 351 - -
Vium5740g00001 454 MobiDBLite consensus disorder prediction 299 454 - -
Vium5740g00001 454 MobiDBLite consensus disorder prediction 374 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5740g00001 Vium-Chr5740 4 7396 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5740g00001 35 193 Inorganic Solute Cotransporters AT2G37920 72.561 1.65e-77 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5740g00001 - - pvu:PHAVU_010G039900g 669.848