Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5723g00004 ATGCAAACTAACTCCAACTGCACAGAAAAAGAAAAGGAAGAAAGTGTTTGGAGAGTGAAGATGGCTGGAACAGAAGGAGAAGCTGATGGAAGAAAAAACACGGAGGAAATAAGTGTAACAGCAAAGGCAGAATTAAAGCGCATAGATTCTCTGAATTTAGAGGCTGGAAGAGTTTCTATGGATGCATACAAGATGGGGTGGAGAATTACTCTTAGCTTAGCATTTCAAAGTCTAGGAATTGTATATGGTGATATCGGGACATCACCACTTTACGTATACGGTAGCACCTTCCCATATGGAATCAAGCATAAGGATGATATTTTGGGTGTTTTGTCTCTCATCATCTACACCATCCTCTTTATACCTATGATCAAATACGTTTTCATCGTACTGTGGGCTAACGACAACGGCAACGGTGGAGCCTTTGCACTGTATTCATTAATATGTAGGCACATAAAAATAAGTTTGATTCCAAATGAACAACCAGAGGATAGGGAGCTTTCTAATTACAAACTAGAAACCCCATCGAGTCAGGTGAGACGTGCCCACAAACTAAAGCAGAAACTCGAGGGCAGTAATGTTGCACGAGTTGTGCTTGTGCTTCTTGCAATCATGGGAACCTCCATGGTTATGGGAGACGGCATTCTTACTCCATCAATATCAGTACTTTCAGCTGTAAGTGGGATCAGTAAATCATTAGGTCAAGATGCTGTTGTGGGAATCACAATAGCAATTTTGATAGTCCTATTCTCTGTTCAACGTTTTGGTACTGATAAAGTGGGATTCTCATTTGCTCCAATTATTTTGGTGTGGTTTTTGTTCATCGCTGGAATTGGTTTTTACAACTTATTCAAATATGACATTGGAGTATTACGTGCCTTTTATCCAAAATATATATATGATTACTTCAAACGTAATGGAAAGAATGGATGGTTATCACTTGGTGGAGTTTTTTTATGCATAACAGGATCTGAGGCTATGTTTGCTGACTTGGGTCACTTTAATGTACGAGCCATTCAGATAAGCTTTTCTTTCATTACATGTCCATCGATCGTGATTGCATACATTGGGCAAGCAGCATATTTGAGGAAGTTTCCTGACAATGTAGCCAATACTTTCTATGAATGCATTCCAGGTCCCTTATATTGGCCAACTTTTGTTGTGGCTGTTGCTGCTGCCATTATAGCTAGCCAGGCAATGATTTCCGGAGCATTCTCCATTATATCCCAAGCCCTAAGTCTAGGTTGTTTTCCAAGAGTTAGGGTGGTGCACACTTCCATTAAACATCATGGTCAGGTGTATATTCCGGAAATCAACTACATGTTCATGATCGCATGTATCGTGGTGTGTGCTGCCTTCAAGACCACAGAAAAGATTAGTCATGCATATGGGATTGCAGTTATTGGTGATATGATGATTACAACAACTCTAGTTTCGCTGATAATGCTCGTTTTATGGGAAAAGAGTCTATGGCGTGTGGCATTATTCTTCTTTGGATTCAGTTTCATTGAATTACTTTATTTAACATCTCAACTGACCAAGTTCATAGGAGGAGGATATTTTCCAATTGTATCAGCTATGTTCTTGACGTCGATTATGGGAATTTGGCACTATGTACACAAAGAAAGATACATGTTTGAGTTAAAAAACAAGGTATCAAGTGCATATCTCGATGAAGTAGCGAACAACCCAAATGTAAGGCGAGTGCCAGGAATTGGACTTTTGTATTCTGAGCTGGTGCAAGGCATTCCTCCCATATTCCCACATCTTATAGCTAGCATTCCATCTGTCCATTCAATTCTTGTGTTTGTGTCTATTAAAACAATTCCGGTGAGTAGTGTTGCATCCGAAGAGAGGTTCTTGTTTAGGCAGGTGGAACCAAGAGAGTACAGAGTTTTTCGTTGTATTGTGAGGCATGGTTACAATGACCTTCTTTTGGATCTTGCAAAGTTTGAGTCAGAATTGATACAAAATCTAAAGGCATTCATTCAAGAGGAGAACTACCATATGGTGGAGGTGGAGGTCGAGGGAAGTGGAAATGCAATTGAACAAGCAGCGATAGTTGAAAGCACTGATAAGAGTGAAGCACATTGTTCCTCGAATAAAATAATCACCAATCAATCAGCATTAGCTTCACCCGACTCCATTCGATCAGTGGGGAGGAGTGACACCAAGTTATTTGCTAACTTCCTTGCCTCATCCGTCCATGGAGCTGAAGAAGAACTCAAATTCATAGAAAAAGCATTGGAGAAAGAAGTGGTGTACATGCTGGCAGAAGCAGAAGTTGTGGCTCATCCAAACTCCTCCATCATCAATAAGATCATTGTGAATTATGTGTACAGTTTCTTTCGAAAGAACTTCAGACAAGGTCAAAGTTCCATGGCAATCCCTTGCAAGAGACTTCTCAAGATTGGAATGACTTATGAAATATGA 2433 0.4003 MQTNSNCTEKEKEESVWRVKMAGTEGEADGRKNTEEISVTAKAELKRIDSLNLEAGRVSMDAYKMGWRITLSLAFQSLGIVYGDIGTSPLYVYGSTFPYGIKHKDDILGVLSLIIYTILFIPMIKYVFIVLWANDNGNGGAFALYSLICRHIKISLIPNEQPEDRELSNYKLETPSSQVRRAHKLKQKLEGSNVARVVLVLLAIMGTSMVMGDGILTPSISVLSAVSGISKSLGQDAVVGITIAILIVLFSVQRFGTDKVGFSFAPIILVWFLFIAGIGFYNLFKYDIGVLRAFYPKYIYDYFKRNGKNGWLSLGGVFLCITGSEAMFADLGHFNVRAIQISFSFITCPSIVIAYIGQAAYLRKFPDNVANTFYECIPGPLYWPTFVVAVAAAIIASQAMISGAFSIISQALSLGCFPRVRVVHTSIKHHGQVYIPEINYMFMIACIVVCAAFKTTEKISHAYGIAVIGDMMITTTLVSLIMLVLWEKSLWRVALFFFGFSFIELLYLTSQLTKFIGGGYFPIVSAMFLTSIMGIWHYVHKERYMFELKNKVSSAYLDEVANNPNVRRVPGIGLLYSELVQGIPPIFPHLIASIPSVHSILVFVSIKTIPVSSVASEERFLFRQVEPREYRVFRCIVRHGYNDLLLDLAKFESELIQNLKAFIQEENYHMVEVEVEGSGNAIEQAAIVESTDKSEAHCSSNKIITNQSALASPDSIRSVGRSDTKLFANFLASSVHGAEEELKFIEKALEKEVVYMLAEAEVVAHPNSSIINKIIVNYVYSFFRKNFRQGQSSMAIPCKRLLKIGMTYEI 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5723g00004 810 NCBIfam potassium uptake protein 73 810 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium5723g00004 810 Pfam K+ potassium transporter 74 643 IPR003855 GO:0015079|GO:0016020|GO:0071805
Vium5723g00004 810 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 65 809 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5723g00004 Vium-Chr5723 31273 36502 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5723g00004 21 810 Inorganic Solute Cotransporters AT4G13420 56.015 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5723g00004 K03549 - gmx:100814313 1221.84