Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5714g00005 ATGGGCAAGAAAATGAAGCTTCCTTCCCTTCTCCACAACAAGAACTCACACCCCAAACCTTCTTCCACTTCCTGGCCATGGCCCTCTTGCCACCAACCTCGAACCCTCTCTTTTCGAGACCAAAACGATGTCGCTTTCAAAACCATCAACCCAGCCTACTTCGACATGCCCGAGAGCTCCCACTCCTTCTTCACTGTCTCTCCCGACTCTGGAAGCTTCTCTACCGCTTCAGAAGAAGATTCTAGAAGACCGGATTCCCTTGAGACCCTCATTCGCCCCTTGCCTTCCGACCGTTTGTTCTTCCACCCCGACCAGACAAGCTCCATATTAGAGTCCAAAGCAGGAACATCGACACCAACACCAACACAAACACAAACAACTACAACACCAACACCACCACCAACAACAACAACGTTGCCCTTCAAAGACAGCGTGGTTATGTCTGTGGAGTCTCAGGACCCTTACGTGGACTTCCTCAGGTCCATGGAAGAGATGGTGGAAGCCCAGTGCGTTAAAGACTTTGATGGTCTCCAAGAGCTTTTATGTTGGTATTTGAAAGTCAATGGAAAAAGCAACCATGGTTATATTGTCGGTGCTTTCATTGATCTATTGGTGGCTTTTTCTGATATAAACTCTCATTCTCCTTCTTCCCCTTTGTCATTCTACAGCTCTTCTCTTTCTTCCTCTTGCAGCACTCACTGTGTTTCATGTTTGGAAGCTGAGGACGAGGTTGATACAGCTACCCATAATTCTTCTTTCTTGTTAGAACAAGTTAGGGAAGACCAGTCTTCATCTTCTTCATCCTCTTTGAATTAA 816 0.4657 MGKKMKLPSLLHNKNSHPKPSSTSWPWPSCHQPRTLSFRDQNDVAFKTINPAYFDMPESSHSFFTVSPDSGSFSTASEEDSRRPDSLETLIRPLPSDRLFFHPDQTSSILESKAGTSTPTPTQTQTTTTPTPPPTTTTLPFKDSVVMSVESQDPYVDFLRSMEEMVEAQCVKDFDGLQELLCWYLKVNGKSNHGYIVGAFIDLLVAFSDINSHSPSSPLSFYSSSLSSSCSTHCVSCLEAEDEVDTATHNSSFLLEQVREDQSSSSSSSLN 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5714g00005 271 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 41 207 IPR038933 GO:0045892
Vium5714g00005 271 ProSiteProfiles OVATE domain profile. 145 206 IPR006458 -
Vium5714g00005 271 Pfam Transcriptional repressor, ovate 151 206 IPR006458 -
Vium5714g00005 271 MobiDBLite consensus disorder prediction 14 30 - -
Vium5714g00005 271 MobiDBLite consensus disorder prediction 1 30 - -
Vium5714g00005 271 MobiDBLite consensus disorder prediction 110 140 - -
Vium5714g00005 271 NCBIfam uncharacterized plant-specific domain TIGR01568 145 207 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5714g00005 Vium-Chr5714 25505 26695 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Vium5714g00005 Ovate 6.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5714g00005 - - vum:124838078 429.869