Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5690g00001 ATGCATATATACACACAGATACTGATAGAGACTCTGCTAAAGAAGCCGGGGGTCATGGAAGAGCACCTTATCAAGATTATTTCCTTCCTTTTTATCTTCTTCTTAAGCATAAAATTACTATTCTCCAGAAAAAGACAAAAAAACCCACCACCAAGTCCACCTTCTCTTCCGGTAATAGGCAACCTTCACCAGCTGAAACAGCCGGTACACCGCACCTTCCACGTCCTATCACAAAAATACGGACCTATTTTCTCTTTCCGGTTCGGCTCACAGCCGGTCCTCGTCGTTTCATCTGCATCCGCCGCCGAAGAATGTTTCACCACAAACGACATCATATTCGCGAATCGTTTCCCTTCCATCAAGACCAAGTTCCTCGGCTACGACAACACCATTCTTTTAGCAGCATCCTACGGCGACCACTGGCGGAACCTGCGACGTATCAGCTCCCTCGAGATCCTCTCATCTCAACGTCTTAATTCCTTTTCGGGAATCCGAATCGACGAGACTCTGAAGCTGCTCCAAAATCTGGCTCGAGCCTCCAACAAAGAAGTGTTCACGAGAGTGGAGTTAAGGTCCATGTTCGCGGATCTCACATTCAACACAATCATGAGAATGGTGTGTGGAAAACGCTACTACGGCTCCGAATACGAGGGGACCAACGCCGAGGAGGCTAAGAAGTTCAGAGACCTCATGAATGAGATGGCTCAGTTCGGGTTGGGATCGCACCTCGGAGATTTTGTGCCTGTCTTCAGATGGTTCGATTTTAACCGTAGCCACACGAAGTTACGAAAAGTTGGAGAGAAGATGGACGCCCTGTTTCAAGGACTCGTTGACGAACATCGGAACAAAGATCAAGACTCAAACACCATGATAGGACGTATGCTGCATTTACAAGAGTCACAGCCTGAGTATTACACCGACCAAATTATCAAAGGCCTTGTAATGGTGTTGATTGTGGCTGGAACAGAGACTTCCGCTATAGCATTAGAGTGGGCCATGTCGAATTTGTTGAACAATCCGGAAGTGTTGGAAAAAGCAAGGATTGAATTGGACACCCTGATTGGAGAAGAGTGTTTGATGAAGGAAGAGGATGTAAGCAAATTGCAGTACCTTCAGAATATAATCACTGAGACTCTGCGATTGCATCCTCCAGCGCCAATGCTATTGCCTCATTTCTCCTACGAAGATTGCACGGTGGGAGGGTATGATGTACCAGGTAAGACCATGTTAATGGTGAATGCATGGACCATACATAGGGATCCGGAGCTGTGGGTTGACCCAACAAGCTTCAAGCCGGAGAGGTTTGAGGATGGTCCCATAGACGCAAACAAGCTAATGCCTTTTGGGTTGGGGAGGAGAGCGTGTCCCGGTGCAGCCATGGCACAAAAAACTTTGAACTTGATTTTGGGTTCGTTGATTCAATGCTTTGAATGGGAAAGGATCGGAGAAGAGGAAGTTGACATGACCGAAGGACGGGGAACTCTGGTGCCCAAGGCCATTCCATTGGAGGCCAAATGCAAAACGCGTCCAATCATTAGCAAGATATTCTGA 1551 0.4732 MHIYTQILIETLLKKPGVMEEHLIKIISFLFIFFLSIKLLFSRKRQKNPPPSPPSLPVIGNLHQLKQPVHRTFHVLSQKYGPIFSFRFGSQPVLVVSSASAAEECFTTNDIIFANRFPSIKTKFLGYDNTILLAASYGDHWRNLRRISSLEILSSQRLNSFSGIRIDETLKLLQNLARASNKEVFTRVELRSMFADLTFNTIMRMVCGKRYYGSEYEGTNAEEAKKFRDLMNEMAQFGLGSHLGDFVPVFRWFDFNRSHTKLRKVGEKMDALFQGLVDEHRNKDQDSNTMIGRMLHLQESQPEYYTDQIIKGLVMVLIVAGTETSAIALEWAMSNLLNNPEVLEKARIELDTLIGEECLMKEEDVSKLQYLQNIITETLRLHPPAPMLLPHFSYEDCTVGGYDVPGKTMLMVNAWTIHRDPELWVDPTSFKPERFEDGPIDANKLMPFGLGRRACPGAAMAQKTLNLILGSLIQCFEWERIGEEEVDMTEGRGTLVPKAIPLEAKCKTRPIISKIF 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5690g00001 516 PRINTS E-class P450 group I signature 197 215 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5690g00001 516 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5690g00001 516 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5690g00001 516 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5690g00001 516 PRINTS E-class P450 group I signature 77 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5690g00001 516 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5690g00001 516 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5690g00001 516 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5690g00001 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Vium5690g00001 516 Pfam Cytochrome P450 50 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5690g00001 516 PANTHER CYTOCHROME P450 82C3-RELATED 29 509 - -
Vium5690g00001 516 SUPERFAMILY Cytochrome P450 50 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5690g00001 516 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5690g00001 516 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5690g00001 516 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5690g00001 516 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5690g00001 516 FunFam Cytochrome P450 family protein 41 512 - -
Vium5690g00001 516 CDD CYP81 81 502 - -
Vium5690g00001 516 Gene3D Cytochrome P450 41 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5690g00001 Vium-Chr5690 2309 4088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5690g00001 26 516 Cytochrome P450 AT4G37370 55.668 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5690g00001 K13260 - gmx:100804509 718.768