Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5687g00005 TTTGGTTGTGGAAATGCATGTATTCAGGCAGGATTGCTAACGGGACCAACATTTTTGGGGAGAATTTTATGCCTTAATAACTTGTTCTGCCAAAGACCTATCTATGTAACTCAGGCAATCTCTCTTTTCGGGATGACGATGTTTTTGTTCTTGATGGGAGTGAAAGTAGATCCACTTTTAGTTTTTAGAACAGGGAAAAAGACTTGGGCCATTGGCTTGTGTTCTTGTCTATTGCCACTCGTCTTTAGCTTATGTCTTGCTTATATTCTAAGGCAATATTTGTCCCCGGATTTAGAAATCTACAAGTCTCTATATATTATGGCGGCTTTCTCATCAACTGGTTCCTTTCAAGCCACTACCAGTGCATTGCAAGATTTTAAGCTCCTAAATTCCGAGGTTGGTCGATTAGCAATCTCTTCATCTATGATAAATGGAGCGCTCAGTTCGTTATGGCAAGGCATTTTACGCACACTGTATTCAAATTCTGTGCAGAAATACACAGACTTATCTTTATCATTGGGTTGCCTCTCTCTGATTTTGATGTTGCTTGTCATCCTGTGTATTTGTCGACCTATCATGTTATGGATGATACGCATGACGCCCAAAGGGGAACCTGTGAAAGAGTCCTACATAGTTTCCATTTATGTTATGGTGTTGGGCTGTTCACTCTTTAGTGAAATCATTGGGGAGCACTACCTGATTGGACCATTGATTCTTGGCCTAGCAGTGCCAGAAGGCCCACCTCTTGGATCAGCATTGGTAGAGAGGCTAGATACCTTGATCTCGGGACTGCTTTTGCCCTTGTTCTTCTTCTCTTCCAGTGCTATGTTCAAGATCGATCTAGTTCATCTCTATGACTTCACTGTTGTGCAACTTTTGGCCATAGCTAACTTCTTTGCCAAGCTTGCAGGAGCCGTGTTGCCCTCACTCTACTGCAAGATACCACTCATTGATGCACTTGCCTTAGGCCTCATCCTCAATTCCCAAGGCATCACACAGTTGCTGAACTTGCAAAGTTTACACTACTTTCATACTTTAGATGATACATCCTACGCGCAAATGCTGATAGCTTTAATATGGTTGACAGCAGCTTCCAACCCCATAGTCAAATTCTTGTATGACCCATCTAAAAGTTACTTGTCTCTAACAAGGTGGAGAACCATTGAGCATTCTCCTCCCGACGTTGAACTTCCGATCATTGCATGCATACACTGTGAGGAAAACACTACATCCATGATCAATTTTCTAGAAATATCTAACTCCAGAGTTGAAAGTCCCATTTACTGCCATGTTCTACACCTGCTTAAACTGAAAGGTAGAACAGCCCCACTTTTGATAGATCATGAACTCAAGTGCAGCAGCAATCTATGGCGCACTAATCATTCATTGAACATAATAAATGCCTTTAAATCATATGAGCAACACAGCAGAAGCGTGAACGTGAAAGTCTACACTTGTATCTCCCATTATGAGACAATGCACGATGAGATATGCATGCAGGCTGCAGAGAAAAGAGCATGCATATTAATTGCACCTTTTCACAAGCACTTTAGAACAACTGGGGTTATAGAATTAGCAAACCCCATTAGAGCATTGAATCGCCATTTGCTGAGAACCGCACCTTGTTCCGTTGGGATCTTAGTTGAACGCGGGAGTTTTGTTAGCAACAACCCTCTAACAACTACATCCTTTTATAATGTTGCAGTTGTATTTATAGAAGGGCCAGATGACCGTGAAGCCTTGGCATATGCAATGCGCATGGCAGATCACCCCAATGTAAAGGTCACTGTAATTAGGATAACGAAAACTCGCAGGAAAAGTAGAACTCCGATGAGAGATCCTGATGCTGAAATAGTTCACAAGTTTATGAGCAGCTACCTCCGAATGAAACGACATGATTTCAAAGAGCAAGTTGTGAGAGATAGTCTTGAAATGGTTGGTGCCATTAAGGAACTCGAAGGTTGCTTTGATTTGATTTTGGTTGGTAGACGCCACGAGAGTGAGTCTTCAATGTTCTATGGAATGAATGAGTGGATTGAGTACCCAGAACTTGGGTCTGTAGCAGACATGTTAGTGTCTTCAGATTCTACCTTTGACGGCTCAGTTTTGGTGGTGCAACAACAAAATAAGGAAGGGTCAAAGGTTGGTTGTCAAGATTATTACAATAAAGAAAATTCTGTCACCAAGAGTGAATTACCAAATGTTTTGGATGTGCATCCTGATACAAAGCTGTGGCCAGTTGTCTAA 2247 0.4174 FGCGNACIQAGLLTGPTFLGRILCLNNLFCQRPIYVTQAISLFGMTMFLFLMGVKVDPLLVFRTGKKTWAIGLCSCLLPLVFSLCLAYILRQYLSPDLEIYKSLYIMAAFSSTGSFQATTSALQDFKLLNSEVGRLAISSSMINGALSSLWQGILRTLYSNSVQKYTDLSLSLGCLSLILMLLVILCICRPIMLWMIRMTPKGEPVKESYIVSIYVMVLGCSLFSEIIGEHYLIGPLILGLAVPEGPPLGSALVERLDTLISGLLLPLFFFSSSAMFKIDLVHLYDFTVVQLLAIANFFAKLAGAVLPSLYCKIPLIDALALGLILNSQGITQLLNLQSLHYFHTLDDTSYAQMLIALIWLTAASNPIVKFLYDPSKSYLSLTRWRTIEHSPPDVELPIIACIHCEENTTSMINFLEISNSRVESPIYCHVLHLLKLKGRTAPLLIDHELKCSSNLWRTNHSLNIINAFKSYEQHSRSVNVKVYTCISHYETMHDEICMQAAEKRACILIAPFHKHFRTTGVIELANPIRALNRHLLRTAPCSVGILVERGSFVSNNPLTTTSFYNVAVVFIEGPDDREALAYAMRMADHPNVKVTVIRITKTRRKSRTPMRDPDAEIVHKFMSSYLRMKRHDFKEQVVRDSLEMVGAIKELEGCFDLILVGRRHESESSMFYGMNEWIEYPELGSVADMLVSSDSTFDGSVLVVQQQNKEGSKVGCQDYYNKENSVTKSELPNVLDVHPDTKLWPVV 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5687g00005 748 CDD USP_Like 566 705 - -
Vium5687g00005 748 PANTHER CATION/H + ANTIPORTER 8 709 - -
Vium5687g00005 748 Gene3D - 6 378 IPR038770 -
Vium5687g00005 748 Gene3D - 442 708 - -
Vium5687g00005 748 Pfam Sodium/hydrogen exchanger family 8 364 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5687g00005 Vium-Chr5687 59122 61590 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5687g00005 8 707 Antiporter Super Family AT2G13620 35.246 1.18e-131 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5687g00005 K26731 - gmx:100790969 933.71