Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5648g00021 ATGATCTCTTTCGTAGTGTTTGGGTTCCTCACGCTCCTTTTCACCTTCACATTGCTCACACAGTTGAGAAAGCCCTCTGCTGAAAAGAGAAGGCTACCTCCGGGGCCAAAGAAACTACCTTTCATTGGCAACCTCCACCAGCTTGGAACGTTGCCCCATCGATCCCTTCAACACCTTTCACGTAAGCATGGACCTCTCATGTTCTTGCAGCTAGGTTCCATACCAACCTTGATAGTCTCTTCTGCTGACATGGCGAAAGAGATTTTCAAAAACTATGACTCTGTTTTCTCTGGGAGGCCTCTAGTACACGCTGCAAACCGCCTAGGATACGGCTCAGCCGTGAGTTTTGCACCGTACGGTGAGTACTGGAGGGAAATGAGGAAAATCATGATCTCAGAGTTACTGAGTCCGAAGAGGGTTCGATCGTTTGAAGCTGTGAGATTTGACGAGGTCAAACGTATTCTTGAGGCTGTTTCTCTGTCCCCTGGTCCTGTCGATCTGAGTGAACTTACTCTCTCATTGACCAACAACGTTGTTTGTCGAGTTGCTCTTGGCAAAAGGGAAAAGGGTACGGGTGATTCAAATAAGGTTTACAGAATGCTTAAAGAAACGCAAGAAATGTTGGGAGGGTTCTTTGTGGATGACTTCTATCCACATTTGGGGTGGCTGAACAAATTCAGCGGCCTTGAAAGCAGACTAGAGAAGAATTTCAGAGACATGGATCGGTTTTACGACGAAGTGATCAAGGAGCACGTTGATAAGTCTCGTGAGACGGCAGGAACAGAGCATGAAGATGTTGTGGATGTGCTGCTTCAAGTTCAGAAGGATCCGAATCAACCCATTGCCATCAGTGACCAACAAATCAAGGGAGTACTAGTGGACATATTTGTAGCAGGAACTGATACTGGTGCAGCAACAATGATATGGATAATGTCCGAGTTGATTAGGAATCCGAAAGCAATGAAAAAGGCACAAGAAGAAGTAAGAGAAATTATGGAGGGAAAGGACATGGTAGAAGAGATTGACCTCCCAAAGCTCTTGTACCTCAAGTTAGTTGTGAAGGAGGCACTGAGACTCCATCCCCCTGCGCCATTGCTTGTACCAAGAGAGACAACAGAGGCCTGCATCATCAGAGGGTTTCAAATCCCTGCCAAAACGAGAGTGCTTGTCAATGCAAAATCAATAGCAATGGATCCAGCTTGTTGGGAGAATCCAAATGAGTTCTTACCAGAGAGGTTCTTGAACAGCTCAGTAGATTATAAAGGGCAACACTTTGAGATGTTGCCATTTGGGGTAGGCCGAAGGAGTTGCCCTGGAGTGAACTTTGCCATGCCTCTTGTTGAGTTAGTGCTTGCAAATCTTCTGCTTCGTTTTGACTGGGAACTGCCTGTTGGACTTGGAATACAGGACTTGAATATGGAAGAAGCAATTGGCATAACCATGCACAAGAGAGATCACCTTTGGCTGAGAGCCACCCCCTTTCACGTGTAG 1491 0.4628 MISFVVFGFLTLLFTFTLLTQLRKPSAEKRRLPPGPKKLPFIGNLHQLGTLPHRSLQHLSRKHGPLMFLQLGSIPTLIVSSADMAKEIFKNYDSVFSGRPLVHAANRLGYGSAVSFAPYGEYWREMRKIMISELLSPKRVRSFEAVRFDEVKRILEAVSLSPGPVDLSELTLSLTNNVVCRVALGKREKGTGDSNKVYRMLKETQEMLGGFFVDDFYPHLGWLNKFSGLESRLEKNFRDMDRFYDEVIKEHVDKSRETAGTEHEDVVDVLLQVQKDPNQPIAISDQQIKGVLVDIFVAGTDTGAATMIWIMSELIRNPKAMKKAQEEVREIMEGKDMVEEIDLPKLLYLKLVVKEALRLHPPAPLLVPRETTEACIIRGFQIPAKTRVLVNAKSIAMDPACWENPNEFLPERFLNSSVDYKGQHFEMLPFGVGRRSCPGVNFAMPLVELVLANLLLRFDWELPVGLGIQDLNMEEAIGITMHKRDHLWLRATPFHV 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5648g00021 496 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00021 496 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00021 496 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00021 496 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00021 496 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00021 496 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00021 496 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00021 496 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00021 496 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00021 496 Pfam Cytochrome P450 33 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00021 496 CDD CYP71-like 62 487 - -
Vium5648g00021 496 Gene3D Cytochrome P450 22 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00021 496 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Vium5648g00021 496 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00021 496 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00021 496 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00021 496 FunFam Cytochrome P450 99A2 22 492 - -
Vium5648g00021 496 PANTHER CYTOCHROME P450 71B11-RELATED 16 492 - -
Vium5648g00021 496 SUPERFAMILY Cytochrome P450 33 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5648g00021 Vium-Chr5648 146787 150011 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5648g00021 22 492 Cytochrome P450 AT4G31500 44.583 2.84e-142 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5648g00021 K20617 - gmx:100806157 763.837