Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5648g00013 ATGGTTCTTAAACAAAGGCCTTTTGAGCAAATGGAAGGAGTATTCTCTTCTACCTTCTATCTTTCTCTTTCCTTCTTCATCAGTGTTCTGTTATTCTTTAAGCTCGCAAGAAGATCCAAACCAAAAACCAATCTGAATCTGCCACCATCTCCACCAAAGCTCCCATTCATAGGCAATCTGCATCAGTTTGGGACACTGCCACATCGAGCTCTTCGAGATCTCTCTCTAAAATATGGAGATATAATGATGTTGCAGTTGGGGCAGATGCAAAATCCAACCCTCGTCGTTTCATCTGTAGATTTGGTCACCGAAATAATCAAAACACATGACCTAGCCTTTTCGGACCGACCCCAAAACACTTCCTCTAAAATCTTACTCTACGGATGCACAGATGTTGGCTTCTCACTCTATGGAGAAAACTGGAGACTGAAAAGAAAAATATGTGTTCTTCAACTTTTGACCACCAAAAGGGTGCAATCATTTCGAGTCATCAGAGAAGAAGAAGGTGGGGAGTTGGTGAAAAAGCTACGTGAAGCAAGCTCGAACGATGCCAGTTACGTAAATCTAAGTGAGATGATTATGTCAACAACAAATAGTATCGTGTGTAAATGTGCTCTTGGAAGGAAGTTTGCAGGAGATGGTTACAGCAGAGTGATAGTGTTGGCAAGGGAAGCCTTGATTCATATTGCAGCTTTCACCGTTAGAGATTACTTCCCTTGGTTGGGTTGGGTTGATGTTGTTACTGGAAAAATTCAGAAATACAAGGCCACAGCTGCAGCAATGGATGCTTTATTTGAAGAGGTGATTGCAGAACGTATGAGGCTTAGAAGAGAAGGTGAACACTCCAAAATGAAAGATTTCTTGGATATTCTCCTCAACCATCACGAGGACAACACGCTAGGATACGAGTTCACCAAAAATGACATCAAATCACTGATAACGGACATGTTTCTGGGAGGTACCGACACAACTGCAGCCACATTAGAATGGGCCATGTCAGAACTTATGAGGAACCCAACCACAATGAAAAAAGTGCAAGAAGAAGTGAGGAGAGTAGTAGGTCATAAATCAAAGGTGGAAGAGAATGATGTCAATGAAATGCGATTTCTAAACTGTGTAGTCAAAGAAACTATAAGGTTGCACCCTGCAACTCCTCTTTTGGCTCCTCGAGTAACAATGTCTGATGTAAAACTAAATGGATACGATATTCCTGCAAAAACAACGGTATATATCAATGCATGGGCAATGCAAATGGATCCTAAACTTTGGGATCGTCCTGAAGAGTTTCTGCCAGAGAGATTTGAAAACAGTGATTTTGATTTCAAAAACCAAGAAAACTTTCACTTTATTCCATTTGGTTTTGGAAGAAGAGGATGTCCTGGAATGAGTTTTGGAATCAGTTCAATTGAGTATGTGCTTGCTAATCTTCTTTGTTGGTTCGACTGGAAGTTGCCTGAAACTGGTACTGCTACACTAGACATGACCGAGATATTTGGACTTGTTGTCTCAAAGAAACTACCACTTCTCCTTAAACCAAAACCTTTTCATCTTGAGTAA 1557 0.4078 MVLKQRPFEQMEGVFSSTFYLSLSFFISVLLFFKLARRSKPKTNLNLPPSPPKLPFIGNLHQFGTLPHRALRDLSLKYGDIMMLQLGQMQNPTLVVSSVDLVTEIIKTHDLAFSDRPQNTSSKILLYGCTDVGFSLYGENWRLKRKICVLQLLTTKRVQSFRVIREEEGGELVKKLREASSNDASYVNLSEMIMSTTNSIVCKCALGRKFAGDGYSRVIVLAREALIHIAAFTVRDYFPWLGWVDVVTGKIQKYKATAAAMDALFEEVIAERMRLRREGEHSKMKDFLDILLNHHEDNTLGYEFTKNDIKSLITDMFLGGTDTTAATLEWAMSELMRNPTTMKKVQEEVRRVVGHKSKVEENDVNEMRFLNCVVKETIRLHPATPLLAPRVTMSDVKLNGYDIPAKTTVYINAWAMQMDPKLWDRPEEFLPERFENSDFDFKNQENFHFIPFGFGRRGCPGMSFGISSIEYVLANLLCWFDWKLPETGTATLDMTEIFGLVVSKKLPLLLKPKPFHLE 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5648g00013 518 FunFam Cytochrome P450 83B1 34 511 - -
Vium5648g00013 518 PANTHER CYTOCHROME P450 71B11-RELATED 31 512 - -
Vium5648g00013 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Vium5648g00013 518 Pfam Cytochrome P450 48 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00013 518 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00013 518 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00013 518 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00013 518 SUPERFAMILY Cytochrome P450 48 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00013 518 CDD CYP71-like 77 503 - -
Vium5648g00013 518 PRINTS E-class P450 group I signature 196 214 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00013 518 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00013 518 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00013 518 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00013 518 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00013 518 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00013 518 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00013 518 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium5648g00013 518 Gene3D Cytochrome P450 33 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5648g00013 Vium-Chr5648 109872 112216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5648g00013 48 515 Cytochrome P450 AT3G26330 42.977 1.04e-132 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5648g00013 K20617 - gmx:100803922 784.637