Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5629g00012 ATGGCGACGTTTTCAATTGGGACACACTTGTCCATGTTCCAGAATTTGCGCAACTCCAAACTTCCCCTCCATGGTCTGAGCACTGTTGAACCTTCACCCTTCTTTGGCTCTTCTTCTGGCAGAATCAGATTCACGGGTACAATTCCCACTTTGCTCCGTCACAATGTATTGGCACGTGCTGAAGATAAGGCCAGGGACCCTACATCTTCTTCGTTTCAGACTCAACAAAGTCCACAGTCACAGAACTTGACACCGGAATCTGGAAGTTGCGATCCCCTCTGTTCACTCGACGAAACAAGCTCGCAAGAGTTTGAAGAAAGCTACCAGCCTAAGACTGATTCGCTCAAAGCTGTAGCAATATTAGGAGCAGCTGCAACTGGGGCAGTGGCAATTAACCATTCTTGGGTGGCCACCAATCAGGATCTTGCTATGGCTTTGCTATTTGCACTAGGATATGCAGGGATCATTTTTGAAGAATCTCTAGCCTTCAATAAAAGTGGCGTGGGACTTGTGATGGCTGTAGGCTTATGGGTGATACGGAGTCTAGGGGCTCCTTCAACTGATATAGCTGTTTCAGAGCTTACACATGCATCTGCGGAAGTCAGTGAAATAGTATTTTTCTTGCTTGGTGCAATGACCATTGTTGAGATTGTTGATTCTCATCAAGGATTTAAGCTGGTTACTGACAATATAACAACCCGAAATCCGCGCCTCCTCCTCTGGGTGATTGGATTTGTTACGTTTTTTCTCAGTTCAGTTCTAGACAACCTTACATCTACCATAGTTATGGTTTCCCTATTGCGGAAATTAGTACCTCCATCTGAATACCGAAAGATTCTTGGAGCTGTTGTTGTAATAGCAGCAAATGCTGGGGGTGCATGGACTCCTATCGGTGATGTTACAACTACTATGCTGTGGATACATGGCCAAATATCTACAGTTCAAACAATGAAGGGTTTATTTGTACCTTCAGCAATTTCTCTGGCTGTTCCACTGGCTCTAATGTCTCTGACTAGCGAAGTTAACGGGAAGGGACAAAATTCTCCCAATGTCTTGGCATCTGAACAAATTGCTCCTCGAGGACAGCTTGTTTTCTCAGTGGGTTTCGGAGTTTTGGTTTTTGTCCCAGTCTTCAAGGCTCTAACAGGTTTGCCTCCTTACATGGGAATGCTGCTGGGACTCGGTGTGCTTTGGATCCTTACAGATGCAATCCATTACGGTGAATCTGAAAGGCAGAAGCTAAAAGTACCACAGGCTCTCTCAAGGATAGACTCTCAAGGAATACTATTCTTCCTGGGAATTCTATTGTCCGTTAGCAGCCTGGAGGCAGCAGGGATTCTTCGAAAAATAGCAAACTACCTTGATGCACATGTTGCTAGCATTGAACTGATTGCAAGTGCTATTGGTGTCATATCTGCAGTAATAGACAATGTTCCATTGGTTGCGGCAACAATGGGAATGTATGATGTCGTCTCTTTCCCTCAAGATTCTGAGTTCTGGCAATTGATTGCATTTTGTGCCGGAACTGGAGGTTCCATGTTAATTATTGGCTCAGCTGCTGGAGTTGCGTTCATGGGGATGGAAAAGGTGGACTTCTTTTGGTACTTACGAAAGATTAGTGGCTTTGCTTTTGCAGGTTATGCCGCTGGTATTGTTGCCTATCTAGCACTTTATAAACTCAACATCTCCCTACCAACTCTAGCAGAGGTTCCTTTCCTCTCTGGTTCATAA 1731 0.4477 MATFSIGTHLSMFQNLRNSKLPLHGLSTVEPSPFFGSSSGRIRFTGTIPTLLRHNVLARAEDKARDPTSSSFQTQQSPQSQNLTPESGSCDPLCSLDETSSQEFEESYQPKTDSLKAVAILGAAATGAVAINHSWVATNQDLAMALLFALGYAGIIFEESLAFNKSGVGLVMAVGLWVIRSLGAPSTDIAVSELTHASAEVSEIVFFLLGAMTIVEIVDSHQGFKLVTDNITTRNPRLLLWVIGFVTFFLSSVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTVQTMKGLFVPSAISLAVPLALMSLTSEVNGKGQNSPNVLASEQIAPRGQLVFSVGFGVLVFVPVFKALTGLPPYMGMLLGLGVLWILTDAIHYGESERQKLKVPQALSRIDSQGILFFLGILLSVSSLEAAGILRKIANYLDAHVASIELIASAIGVISAVIDNVPLVAATMGMYDVVSFPQDSEFWQLIAFCAGTGGSMLIIGSAAGVAFMGMEKVDFFWYLRKISGFAFAGYAAGIVAYLALYKLNISLPTLAEVPFLSGS 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5629g00012 576 MobiDBLite consensus disorder prediction 67 96 - -
Vium5629g00012 576 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 53 576 IPR045016 GO:0006814|GO:0015297
Vium5629g00012 576 NCBIfam sodium:proton antiporter NhaD 169 399 - -
Vium5629g00012 576 MobiDBLite consensus disorder prediction 63 96 - -
Vium5629g00012 576 Pfam Citrate transporter 154 508 IPR004680 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5629g00012 Vium-Chr5629 87450 93923 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5629g00012 1 576 Antiporters AT3G19490 74.614 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5629g00012 - - gmx:100779521 968.763