Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5600g00066 ATGGTTCAGGGAAGAGGTATTAGTGCAACAACAATGGTCGTGTTGTGCATGTTGGGAGTTTTCTCTGAGATGGCTCATGCAACAACGTACGTGGTTGGAGGATCCATTGGTGGTTGGGCCTTCAACATGACTGGTTGGCCCAGTGGAAAGAGTTTTAAGGCTGGGGACATACTAGTATTCAATTACAATCCGACATATCACAACGTGGTGATAGTGGACGAGGCTGGATACAATTCGTGCACTGCTGGAGCAGGATCAAAAACGTATCAGTCAGGGCATGATAGCATCACTCTTGCGAAAGGAACGACCTACTTCATCTGCACTTTTGATGGTCACTGCGAGGCTAGGATGAAAATTGCAGCTACGGCTGCATGA 375 0.4747 MVQGRGISATTMVVLCMLGVFSEMAHATTYVVGGSIGGWAFNMTGWPSGKSFKAGDILVFNYNPTYHNVVIVDEAGYNSCTAGAGSKTYQSGHDSITLAKGTTYFICTFDGHCEARMKIAATAA 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5600g00066 124 FunFam basic blue protein-like 28 123 - -
Vium5600g00066 124 Pfam Plastocyanin-like domain 42 115 IPR003245 GO:0009055
Vium5600g00066 124 Gene3D - 26 124 IPR008972 -
Vium5600g00066 124 PANTHER BLUE COPPER PROTEIN 25 121 IPR039391 GO:0009055
Vium5600g00066 124 SUPERFAMILY Cupredoxins 29 120 IPR008972 -
Vium5600g00066 124 CDD Plantacyanin 28 123 IPR041844 -
Vium5600g00066 124 ProSiteProfiles Phytocyanin domain profile. 28 124 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5600g00066 Vium-Chr5600 351533 352190 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5600g00066 9 123 Phytocyanin Superfamily AT1G17800 39.167 2.51e-20 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5600g00066 - - mus:103987231 161.384