Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5600g00063 ATGGGGAAAAGTGAGCAACAGCATGTGCAGGAAGAAGGGCAGAGTGGTGGGAGTGAGGTTGAGGCTCCACTCTGTTGGGTCCTTCTTCGACCATTCAGTTTCAAGTGTCTGTTCCTTCTCCTTCTCAGTTTGTCGGCTTTGATTTCTTCACTCTTTTGGGTTCTTCCCAGGCACAACGTTACTTATAGTTTTGATGCAAGAGATGTAATTAAGCAAAATGCTGCTGTCCAGACATCCTTCAGACTGGAAAATCCAGTTTCACAGCTTATTCCATATATTGAAACGTTAGAATATGATATATATGGCGAAATAGCTCTACCAAATACAAAGGTGGCTATCCTGTCCATGCACCAAAGTATTACACCTAACTGTACTGACGTGGTGTTTGGTGTTCTGTGTGATCCGATGAACGGTTCAATAAATCCAGTGTCCTTGAGTGTGCTGAGATCATCTTTGATTGAACTGTTTCTCAAGCAATCCAACCTGACTTTGACACCACCAATATTTGGGAATGCATCGATATTTGAAATCTTGAAGTTTCCTGGAGGATTAACTGTAATACCACCGTACTCTGCTTACATTTGGCAGATGCCTGAGGTTCTGTTTAATTTTACTCTTAATAATTCAATATCTGAAATACTGGAGAATTTTGATGACTTCAAGGAAGAATTGAAGTTTGGATTGCATCTAAACTCTGACGAGAATGTGTACGTGCAAATAACAAATGAAAATGGCTCAACGACAGCTCCTCCAGTAGTAGTCCAGGCTTCAATCATGCCAGGCTTTGGTAGCCTCTTGCCCCAAAGATTAAAACAATTAGCTCAAACAATAACAGGTTCTGCTGGCAAAAATCTTGGCCTTGATAACTCAGTTTTTGGCAGAGTTAAAGAAGTCAGACTATCTACTTTCTTGAAGAAAAAACTTCATGCATCCTCACCTTCTCCTTCTCCAGCTCCATCCCCACAGTTAAGTGATCACTCTGAGCCATCAACTTCACCACATCCTGCTAGTCCGTACTCTCCAATATCACCTGCAACTGCTGAGCCATCTCCCTGTTTTGACTGTGAAGTATCTTCACCTGCACCATCTGTTGTGCCTGAGCATCCTCCTGATCCTTGTCCATATAGTGGCTTCGTACATCATCCCATCTCTTCACCAAAATCTTATTCTAAACCATCCATTTCCCCTGATTATTCACCTTCTGCTGCCCCCACCTCGAATTCTGCCAGCCACACTACTGAAGAAGCTTCTGATCTGTATCATGGATCCAAGCGTCGGCAGGGTATAGAAACATCTAAAAAATTGGTGTCTCAGATGCATGCTCCATCCTCTATATCATCAGCGGGTGGTGATTTCCGAGGGGAAATATTGCTAATGGGACTTTGTATGCTGTTAATTTCTTTTTCTTTTTGTCAATGA 1419 0.4228 MGKSEQQHVQEEGQSGGSEVEAPLCWVLLRPFSFKCLFLLLLSLSALISSLFWVLPRHNVTYSFDARDVIKQNAAVQTSFRLENPVSQLIPYIETLEYDIYGEIALPNTKVAILSMHQSITPNCTDVVFGVLCDPMNGSINPVSLSVLRSSLIELFLKQSNLTLTPPIFGNASIFEILKFPGGLTVIPPYSAYIWQMPEVLFNFTLNNSISEILENFDDFKEELKFGLHLNSDENVYVQITNENGSTTAPPVVVQASIMPGFGSLLPQRLKQLAQTITGSAGKNLGLDNSVFGRVKEVRLSTFLKKKLHASSPSPSPAPSPQLSDHSEPSTSPHPASPYSPISPATAEPSPCFDCEVSSPAPSVVPEHPPDPCPYSGFVHHPISSPKSYSKPSISPDYSPSAAPTSNSASHTTEEASDLYHGSKRRQGIETSKKLVSQMHAPSSISSAGGDFRGEILLMGLCMLLISFSFCQ 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5600g00063 472 MobiDBLite consensus disorder prediction 307 345 - -
Vium5600g00063 472 MobiDBLite consensus disorder prediction 386 416 - -
Vium5600g00063 472 PANTHER F20B24.21 1 447 - -
Vium5600g00063 472 MobiDBLite consensus disorder prediction 417 431 - -
Vium5600g00063 472 MobiDBLite consensus disorder prediction 386 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5600g00063 Vium-Chr5600 305273 310313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5600g00063 1 304 C3H Transcription Factor Family AT3G10810 41.401 9.52e-57 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5600g00063 - - ccaj:109803451 718.383