Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5600g00062 ATGGGGAAAAGTGAGCAACAGCATGTGCAGGAAGAAGGGCAGAGTGGTGGGAGTGAGGTTGAGGCTCCACTCTGTTGGGTCCTTCTTCGACCATTCAGTTTCAAGTGTCTGTTCCTTCTCCTTCTCAGTTTGTCGGCTTTGATTTCTTCACTCTTTTGGGTTCTTCCCAGGCACAACGTTACTTATAGTTTTGATGCAAGAGATGTAATTAAGCAAAATGCTGCTGTCCAGACATCCTTCAGACTGGAAAATCCAGTTTCACAGCTTATTCCATATATTGAAACGTTAGAATATGATATATATGGCGAAATAGCTCTACCAAATACAAAGGTGGCTATCCTGTCCATGCACCAAAGTATTACACCTAACTGTACTGACGTGGTGTTTGGTGTTCTGTGTGATCCGATGAACGGTTCAATAAATCCAGTGTCCTTGAGTGTGCTGAGATCATCTTTGATTGAACTGTTTCTCAAGCAATCCAACCTGACTTTGACACCACCAATATTTGGGAATGCATCGATATTTGAAATCTTGAAGTTTCCTGGAGGATTAACTGTAATACCACCGTACTCTGCTTACATTTGGCAGATGCCTGAGGTTCTGTTTAATTTTACTCTTAATAATTCAATATCTGAAATACTGGAGAATTTTGATGACTTCAAGGAAGAATTGAAGTTTGGATTGCATCTAAACTCTGACGAGAATGTGTACGTGCAAATAACAAATGAAAATGGCTCAACGACAGCTCCTCCAGTAGTAGTCCAGGCTTCAATCATGCCAGGCTTTGGTAGCCTCTTGCCCCAAAGATTAAAACAATTAGCTCAAACAATAACAGGTTCTGCTGGCAAAAATCTTGGCCTTGATAACTCAGTTTTTGGCAGAGTTAAAGAAGTCAGACTATCTACTTTCTTGAAGAAAAAACTTCATGCATCCTCACCTTCTCCTTCTCCAGCTCCATCCCCACAGTTAAGTGATCACTCTGAGCCATCAACTTCACCACATCCTGCTAGTCCGTACTCTCCAATATCACCTGCAACTGCTGAGCCATCTCCCTGTTTTGACTGTGAAGTATCTTCACCTGCACCATCTGTTGTGCCTGAGCATCCTCCTGATCCTTGTCCATATAGTGGCTTCGTACATCATCCCATCTCTTCACCAAAATCTTATTCTAAACCATCCATTTCCCCTGATTATTCACCTTCTGCTGCCCCCACCTCGAATTCTGCCAGCCACACTACTGAAGAAGCTTCTGATCTGTATCATGGATCCAAGCGTCGGCAGGGTATAGAAACATCTAAAAAATTGGTGTCTCAGATGCATGCTCCATCCTCTATATGA 1338 0.4253 MGKSEQQHVQEEGQSGGSEVEAPLCWVLLRPFSFKCLFLLLLSLSALISSLFWVLPRHNVTYSFDARDVIKQNAAVQTSFRLENPVSQLIPYIETLEYDIYGEIALPNTKVAILSMHQSITPNCTDVVFGVLCDPMNGSINPVSLSVLRSSLIELFLKQSNLTLTPPIFGNASIFEILKFPGGLTVIPPYSAYIWQMPEVLFNFTLNNSISEILENFDDFKEELKFGLHLNSDENVYVQITNENGSTTAPPVVVQASIMPGFGSLLPQRLKQLAQTITGSAGKNLGLDNSVFGRVKEVRLSTFLKKKLHASSPSPSPAPSPQLSDHSEPSTSPHPASPYSPISPATAEPSPCFDCEVSSPAPSVVPEHPPDPCPYSGFVHHPISSPKSYSKPSISPDYSPSAAPTSNSASHTTEEASDLYHGSKRRQGIETSKKLVSQMHAPSSI 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5600g00062 445 MobiDBLite consensus disorder prediction 307 345 - -
Vium5600g00062 445 MobiDBLite consensus disorder prediction 386 416 - -
Vium5600g00062 445 PANTHER F20B24.21 1 423 - -
Vium5600g00062 445 MobiDBLite consensus disorder prediction 417 431 - -
Vium5600g00062 445 MobiDBLite consensus disorder prediction 384 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5600g00062 Vium-Chr5600 305273 310315 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5600g00062 1 304 C3H Transcription Factor Family AT3G10810 41.401 3.11e-57 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5600g00062 - - gmx:100788006 679.478