Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5600g00002 ATGGCAGAGGTGCTGCAGCAGGGTCGCTCTCTGGCTGAGACACCAACATATTCAGTTGCTTCTGTTGTTGCTGTCATGGTTTTTGTCTGCTTATTGGTTGAACGTTCTATCTACCGCTTTGGAGAGTGGTTGAGGAAAACAAGAAGGAAGGCACTTTTTGCATCACTGGAGAAACTTAAGGAAGAGCTGATGTTGCTGGGGCTTATCTCTTTGCTGTTGGCACAAAGTGCAAGGTGGATCTCTGAAATTTGTGTGAATTCGTCACTTTTTAGCAGTCGATTTTATATTTGTTCTGAACAAGACCTGGACATCAATGAGAATATCATGCTGGAAAGCTCATCATCTATACCTGGTGAAACTAGTATTCCAAAGGGATTAAATAATGGAGCATTCAACCAATGTGGAGAGGGTCATGAACCGTTTGTTTCATACGAGGGTCTTGAGCAGCTGCACCGGTTTTTGTTTGTTCTCGGAATCACTCATGTTTTGTATAGCTGTCTGGCAGTTGGTTTGGCGATGAGCAAGATCTATAGTTGGCGCAGATGGGAAAATCAGGCTAGGATGCCAAGCGATGGAAACCAGCAAGCAAAGAAAATCAAGCTGATGAAGCGACAGACAACATTTATTTTCCATCGCACTTCTCATCCATGGAGCAGGAGTCCAATCCTAAACTGGATGCTCTGTTTTCTACGTCAGTTTAGGAGCTCTATACAAAAATCAGATTACCTTGCACTACGTTTAGGTTTCATCACTGAGCACAAATTGCCGTTATCTTATAATTTCCATCAATATATGGTTCGAAGCATGGAAGATGAATTTCAAGGAATTCTAGGAATAAGCTGGATGCTTTGGATTTATGCCATAGTGTGCATCTTCGTGAACATCCACGGTCTGAATATATACTTCTGGCTATCATTTATCCCTGCAATTCTTGTCATGTTGATAGGGGCAAAGCTTCAACATGTTGTATCAACCTTAGCACTTGAAATTATGGAGCAGAGAGGTCCGTTTCCCAGGACACAAGTAAAGCCACGCGATGACCTATTTTGGTTCAAAAAACCAGATATACTGTTATGGCTGATACAATTTGTCATATTTCAGAATGCATTCGAAATGGCAACCTTTATTTGGACACTGTGGGGATTTCAAGAAAAATCGTGCTTCATGAGAAATCATTACATGATCATCATTCGGTTGGCATCTGGTGCTATTGTTCAGTTCTGGTGTAGCTATATGACAGTGCCACTGAATATAATAGTTTGTCAGATGGGATCTCGATGTAAGAAGGCCTTAGTGGCGGAGAGTGTTAGAGAGTCCCTGCATAGTTGGTGTAAAAGAGTGAAACACAAGTCTAAGCATGATTCGTTGCATTCACACACGGCAAGATCAGTATGCTCCCTCGAATCAACAATCGATGAGAGGGACGAAATAACAGTGGCATGGTACTCTTACTCGAAGCTCTTCTTTAGCCTCTTTGAATCAGATAACAGTGAGTTCAGTAGACCAGCTGAACTTCGAGACTCCCAACAAAGCAAAAGATTCAATCAAGGTGGCTGGATGTTTGTCTGA 1569 0.4207 MAEVLQQGRSLAETPTYSVASVVAVMVFVCLLVERSIYRFGEWLRKTRRKALFASLEKLKEELMLLGLISLLLAQSARWISEICVNSSLFSSRFYICSEQDLDINENIMLESSSSIPGETSIPKGLNNGAFNQCGEGHEPFVSYEGLEQLHRFLFVLGITHVLYSCLAVGLAMSKIYSWRRWENQARMPSDGNQQAKKIKLMKRQTTFIFHRTSHPWSRSPILNWMLCFLRQFRSSIQKSDYLALRLGFITEHKLPLSYNFHQYMVRSMEDEFQGILGISWMLWIYAIVCIFVNIHGLNIYFWLSFIPAILVMLIGAKLQHVVSTLALEIMEQRGPFPRTQVKPRDDLFWFKKPDILLWLIQFVIFQNAFEMATFIWTLWGFQEKSCFMRNHYMIIIRLASGAIVQFWCSYMTVPLNIIVCQMGSRCKKALVAESVRESLHSWCKRVKHKSKHDSLHSHTARSVCSLESTIDERDEITVASXYSYSKLFFSLFESDNSEFSRPAELRDSQQSKRFNQGGWMFV 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5600g00002 523 PANTHER MLO-LIKE PROTEIN 1 7 472 IPR004326 GO:0006952|GO:0016020
Vium5600g00002 523 Pfam Mlo family 9 474 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5600g00002 Vium-Chr5600 6198 14389 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5600g00002 1 481 MLO family AT1G11000 70.807 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5600g00002 K08472 - gmx:100801624 847.81