Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5573g00001 ATGGGTGAGGAATATGGCATTATATCGAAGGAGACAGTAAAGCCATCTTCCCAAACCCCTATTCAGCACTTCAAACTCTCTTTTCTCGACCAATTGGCTCCTTCATTCCATGTTCCCATTCTGCTCTTTTACTCTGCCTCTGATGTTAGAACCTTTGCTGCCACTGACCACAGTGCACTGTCACAAAAGTTGAAAACTTCTCTGTCACAAGTCCTCACTCTCTATTACCCATTTTGCGGAAGACTCAGAAACTCTTCAATCATTGAGTGCAACGACGAGGGTGTTCTTTTCATCCACTCTAAACTCCCCATTGAGCTCTCAAACATTCTCCAAAACCCTCAACTTCACACCCTCTATGAACTTCTCCCATGTCCTCCTTACAACCTTGAACCACAACAAAGGGACACGTTCGGGATCATGGCAGTTCAGTTGAGCCAATTCAAGTGTGGGGGCATAGCCCTTGGCGTGTGCTTCTCACACAAGATCGCTGATGCTTCCACTGCAGCATCGTTTCTCAACGCTTGGGCTGCAACATCACGTGGACACGGCAATAGCAACCTCGTTCCACCTCCAATGGAAGAGGCAAGTCTGCTTTTCCCATCGAGGAACATATCCGTTGACATGACAAGTGGCATGGTTGGCCAAGAAAAGACTGTGACAAAGAGATTCATATTTAGTGGCAGCAGTATTTCTAGATTGAGACAAACCATAGGGTGCCCCAGATTCAATCCCTCACGCGTTGAAGCCGTGACGACGCTGCTATGGAAATCATCACTGGAAGCAGCAAAAGAAAGTTTAGATTCTGGGGAAGAAAAAATTGTTGCTTCTGCGGTATCCCACACTGNCAAATCAACAATTCAACATACTTACATCAACTAG 879 0.4596 MGEEYGIISKETVKPSSQTPIQHFKLSFLDQLAPSFHVPILLFYSASDVRTFAATDHSALSQKLKTSLSQVLTLYYPFCGRLRNSSIIECNDEGVLFIHSKLPIELSNILQNPQLHTLYELLPCPPYNLEPQQRDTFGIMAVQLSQFKCGGIALGVCFSHKIADASTAASFLNAWAATSRGHGNSNLVPPPMEEASLLFPSRNISVDMTSGMVGQEKTVTKRFIFSGSSISRLRQTIGCPRFNPSRVEAVTTLLWKSSLEAAKESLDSGEEKIVASAVSHTXKSTIQHTYIN 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5573g00001 292 Gene3D - 215 285 IPR023213 -
Vium5573g00001 292 Gene3D - 5 207 IPR023213 -
Vium5573g00001 292 PANTHER F21J9.9 7 278 - -
Vium5573g00001 292 Pfam Transferase family 7 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5573g00001 Vium-Chr5573 23474 24415 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5573g00001 13 198 Monolignol Biosynthesis Gene Families AT5G48930 30.526 1.68e-22 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5573g00001 - K13065 gmx:100792323 345.895