Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5568g00006 ATGGCTCCTTCAGACTCTGAAACTTTGGGGCACCATTCTCAGATTCCGACCTTTCTCTATTCCTGTCCCTCTCCGCCGCAGAAGAAGATGGAAGCTTCAAGCTTCGCGGTTCCTTCTCCCAGTGAGAAACGCAGCATAGAGATGTTTTCGCCGGCGTTCTACAGTGCTTGCACCATCGGAGGAATTCTCAGCTGTGGCCTCACGCACACCGCCGTCACGCCTCTTGACGTTGTCAAATGCAACATACAGATTGACCCTGTCAAGTACAAGAACACCAGCACAGGATTTGGAGTCATGTTTAAGGAGCAAGGACTGAGGGGGTTTTACCGCGGATGGGCACCTACCCTTGTTGGTTACAGCGCACAGGGTGCCTTCAAATATGGATTGTATGAGTACTTCAAGAAGTACTATTCTGACATAGCTGGTCCAGAGTATGCAACGAAGTACAAGACATTGATTTACCTAGCCGGTTCAGCATCTTCTGAGTTGATTGCTGATGTTGCTCTTTGCCCATTTGAGGCTGTGAAGGTCAGAGTTCAAACTCAGCCTGGCTTTGCTAGAGGCCTAGCTGATGGACTCCCAAAGTTAGTCAGAACTGAAGGTGTCTCAGGGTATGCTTATGATGTTATAATTGTTGTTAACTTAAATCTTCCCATTGTTTTGGTAAGAAGGTTGACTGAAGCTGTGGTTCTGGATTCCTTGCAATTACTTTTCCATGCATTCTGTTAG 729 0.4719 MAPSDSETLGHHSQIPTFLYSCPSPPQKKMEASSFAVPSPSEKRSIEMFSPAFYSACTIGGILSCGLTHTAVTPLDVVKCNIQIDPVKYKNTSTGFGVMFKEQGLRGFYRGWAPTLVGYSAQGAFKYGLYEYFKKYYSDIAGPEYATKYKTLIYLAGSASSELIADVALCPFEAVKVRVQTQPGFARGLADGLPKLVRTEGVSGYAYDVIIVVNLNLPIVLVRRLTEAVVLDSLQLLFHAFC 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5568g00006 242 FunFam Phosphate carrier protein, mitochondrial 38 143 - -
Vium5568g00006 242 ProSiteProfiles Solute carrier (Solcar) repeat profile. 149 233 IPR018108 -
Vium5568g00006 242 ProSiteProfiles Solute carrier (Solcar) repeat profile. 52 136 IPR018108 -
Vium5568g00006 242 Pfam Mitochondrial carrier protein 152 204 IPR018108 -
Vium5568g00006 242 Pfam Mitochondrial carrier protein 56 138 IPR018108 -
Vium5568g00006 242 SUPERFAMILY Mitochondrial carrier 55 205 IPR023395 -
Vium5568g00006 242 Gene3D Mitochondrial carrier domain 53 207 IPR023395 -
Vium5568g00006 242 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 32 205 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5568g00006 Vium-Chr5568 150494 152181 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5568g00006 12 223 Chloroplast and Mitochondria Gene Families AT3G48850 57.940 2.31e-97 287
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5568g00006 K15102 - gmx:100804257 367.851