Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5535g00010 ATGACAAGGGAAGGGAATGCTACTCTGAACTCTATCCCAGAATTTGCATGCTACAATACAACATTTGATCTTAACAACAGAATCTGGAGGAGTGATAATGTCATTTCAGAACGTGTTCCTCTTCTGTCTATTCAAATTGCCTACAATATCCTTGCATCTAGTTTTTTTCACCACATCCTCAAGCGATTCCACCTACCTCTTACGGTTGCCCAGATGCTTGGTGGTGTGCTTTTGAGTTCATCATTTTTGGGAAGAATCCCTGGAGTTTTTCACATGATTTACCGTCCGGAAGGAATCATGAGTGTTGAAACCTTTGCGAATGTTGGAATCATGTACTATGTGTTCCTTACTGGGTTGGAAATGAACTGCGACACCATCTTGAGATCAAGCAAGCAGGCTGTAGTCATTGCTGTTGCAAGCATTCTCATTCCAGCATTGGTTGGAGCTGGTTTTCTTGCTCTACAGCATGACTTAGCAGGCGGATCAAGCGTTGCGCTCACTGCTAAAGGGTATATGTTTTGGTGTGCAATTCTTTCTGTCACCAGTTTTCCAGTCCTTGCAAGGCTCCTATCAGATCTCAAGATCCTCTACACAAGGCTTGGAAAAGATGCCTTAACAGCAGCCATTCTAATTGATACATTTGGCTGGGTTTTGTTCTCACTCTTCATTCCCTTTTCCCACCAGGGTGGAAAACCACTCCTCTCACTAATGTGCACATTGCTGTTCATTGTGTTCTGCTTCTGCGTGGTGCGTCCAATCCTGGCTCGAGTGGTTGAACACAGAATGAGGTCTGAGTCATGGAACTCCTCAAAGTTGCTGGATGTGATGATGGGACTTTTTGTTTGTGCATACATCACAGACTTGCTTGGATCACACCATGTTGTTGGGGCCTTTGTGTATGGACTAATTTTGCCCAGCGGGAAGTTTGCTGATTTGTTGTTAGAAATGTTGGATGATTTTGTTACTGCAATTATTGTTCCTGTCTACTTTGCTAGCTTTGGCTTTAGACTAAACCTGGAGTCACTTTGGTCTGAAAACCACACAGTTTTGTTTCCTCTCTTCATGGTGTTCTTGTTAGCCATACCAAAAATTTTGAGCTCTCTGCTGGTCACTGTCTACTATGGTATGTCTTCAAGAGATGGAGTTGGCCTTGGATTGCTCCTCAACACCAAGGGCATCATGGCAGTGATTCTTATAAGCATTGCCTGGGACAAAAGTATTTTGGACCCATATGCTTTCACAATCATGATCCTTGCAGTACTATTCATGACTACGGTGGTATCTCCCTTTATTAATGCCATCTACAAGCCGAAACTTCGGTTCCAGCAGACCCAGCAAAGGACTGTGCAGAAACTATGGTGCGAAGCAGAACTTCGAGTTGCAGCATGTGTCCACAACTATCACCAAGCCATTGGCATGATCTATGTTCTTGAAGCCACAAATGCCACCAGAACTTCCCCTTTACATGTCTCAGTCCTTCACCTTGTGGAACTCACAAGACGCGGCACTGGCCTTCTTGTGGCACAAATCGACAACACAAATGTTCAAGGGGGATCCTCAGAGCAGTATGGATCACAAGAAGAGTTTGAGACCATATGCAATGCATTCAACGAGTTTGTGGAGGAATACAAAGCTGTGAGATTTGACACATCAGGCATTGTTGCAACCTATGAGACAATCCATCAGGACATATACAATGTCACAGAAGAGAAACGTGCAAACCTTATTCTCCTTCCATTCCACAAACAACTAAGCTCGGGAGAGTTAGAAACAACCAAAACTGCATTCTGTGACATAAACCAGAACGTGTTGCAGGCACCACCTTGTTCTGTGGGAATCCTTGTCAACCGTGGACTGAGGTCATTGTCCACTGCAACAATGAGAATCATTGTGATCTTCATCGGAGGGCCTGATGATCGGGAAGCCTTGTCGATCGCATGGAGAATGGCATCACATTCAGCCACAAAGTTGCATGTAGTTAGGCTTCTGGTGTCAGGTACTGAGGTTGCAGAAGGAAAAGCATTCCAGAATGATTCCAGTGGAGTGTTATCTACAGAGATGGACAGTGTTATGCAGAAAGAGCTAGATGATGAACACATATTTCACTTCAGGCACAAAGGGTTGCACAACTGTGACTCCATCACATACTCAGAGAGAGAACTGAGGTTAGAAACTGGTGAGGAGATTCCATCGATCCTCCATGAGATAGACCAAAAAGGGTGTGACTTGTACATTTTGGGACAAGGGAGTGGCAATAACTACACAGTTTTTAAAAGGTTGTTGGAATGGTGTGACAGCCCTGAACTTGGGGTCATGGGGGACATTGTAGCTTCATCCAGTTTTGGCACAAACTCATCACTGCTTGTTGTGCAGCAATACACCATGGAGAGAAAGTCTAAACTTCATTGTAGCAGAAAATATCACACTAGTAAGGTCTGTGATGATATTTTGTGA 2454 0.4409 MTREGNATLNSIPEFACYNTTFDLNNRIWRSDNVISERVPLLSIQIAYNILASSFFHHILKRFHLPLTVAQMLGGVLLSSSFLGRIPGVFHMIYRPEGIMSVETFANVGIMYYVFLTGLEMNCDTILRSSKQAVVIAVASILIPALVGAGFLALQHDLAGGSSVALTAKGYMFWCAILSVTSFPVLARLLSDLKILYTRLGKDALTAAILIDTFGWVLFSLFIPFSHQGGKPLLSLMCTLLFIVFCFCVVRPILARVVEHRMRSESWNSSKLLDVMMGLFVCAYITDLLGSHHVVGAFVYGLILPSGKFADLLLEMLDDFVTAIIVPVYFASFGFRLNLESLWSENHTVLFPLFMVFLLAIPKILSSLLVTVYYGMSSRDGVGLGLLLNTKGIMAVILISIAWDKSILDPYAFTIMILAVLFMTTVVSPFINAIYKPKLRFQQTQQRTVQKLWCEAELRVAACVHNYHQAIGMIYVLEATNATRTSPLHVSVLHLVELTRRGTGLLVAQIDNTNVQGGSSEQYGSQEEFETICNAFNEFVEEYKAVRFDTSGIVATYETIHQDIYNVTEEKRANLILLPFHKQLSSGELETTKTAFCDINQNVLQAPPCSVGILVNRGLRSLSTATMRIIVIFIGGPDDREALSIAWRMASHSATKLHVVRLLVSGTEVAEGKAFQNDSSGVLSTEMDSVMQKELDDEHIFHFRHKGLHNCDSITYSERELRLETGEEIPSILHEIDQKGCDLYILGQGSGNNYTVFKRLLEWCDSPELGVMGDIVASSSFGTNSSLLVVQQYTMERKSKLHCSRKYHTSKVCDDIL 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5535g00010 817 Gene3D - 41 444 IPR038770 -
Vium5535g00010 817 PANTHER CATION/H + ANTIPORTER 28 794 - -
Vium5535g00010 817 Pfam Sodium/hydrogen exchanger family 51 431 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5535g00010 Vium-Chr5535 83608 86462 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5535g00010 17 793 Antiporter Super Family AT2G13620 35.533 3.31e-166 500
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5535g00010 - - gmx:100792990 1164.83