Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5514g00058 ATGGACGACGGCGAGCTCGATTTCTCGACGCAGGAAGTGTTTTCGAGTCCGAACATGGGGGAGCTTCCGAGCAGTGGTTCCATGGACAGTTTCTTCGACGAGCTTCTCAAGGACACGCATGCCTGCACGCACACCCACACATGCAATCCTCCGGGGCCCGATTTTTCGCACACTCATACGTGCTACCACGTGCACACCAAAATCGTGCCGGCACCTGATGAGGACCAGGTGGCCACCGACGACACGGCGGAGTCCGCGGAGAAGAAGTCGAAGAAGCGGCCCCTTGGTAACAAAGAAGCGGTTCGAAAGTACCGTGAGAAGAAGAAGGCTCGCGCGGCCTCGCTGGAGGACGAGGTGGTGAAATTGAGGGCTCTCAATCAGCATTTGATGAAGAAGTTGCAGAACCAGGCTGCTTTGGAAGCTGAAATCGCGAGGCTGAAGTGCTTGCTGGTGGACATAAGGGGCAGGATTGAAGGGGAAATTGGTTCCTTTCCGTATCAGAAATCGCCGAATGCGAACCCTCCGGTGGTTAACCTGCCTGGTTCTTATGTGATGAACCCTTGCAACATGCAGTGTGATGATAGGGTGTATTGCCTTCATCCAGGAGCTGATGGGAGAATCGTGGAGAATGTGTCGTTAAATGGGGAAGAGTTTGGTGGTTGTGAATTTGAGAACCTGCAGTGTCTAGCAAACCAGAATTTGGGGCTCAAGGAGCTGCGTGCATGTGGAGTTGGGCAGGCAGGGTCAAATGTAAATTCTTCTGCGTCAAAAAGAAAAGGGGGATCTCGTGCAGCAACAGCTGGTTGA 807 0.5328 MDDGELDFSTQEVFSSPNMGELPSSGSMDSFFDELLKDTHACTHTHTCNPPGPDFSHTHTCYHVHTKIVPAPDEDQVATDDTAESAEKKSKKRPLGNKEAVRKYREKKKARAASLEDEVVKLRALNQHLMKKLQNQAALEAEIARLKCLLVDIRGRIEGEIGSFPYQKSPNANPPVVNLPGSYVMNPCNMQCDDRVYCLHPGADGRIVENVSLNGEEFGGCEFENLQCLANQNLGLKELRACGVGQAGSNVNSSASKRKGGSRAATAG 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5514g00058 268 Coils Coil 98 142 - -
Vium5514g00058 268 MobiDBLite consensus disorder prediction 1 22 - -
Vium5514g00058 268 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 165 IPR031106 GO:0003700|GO:0006351
Vium5514g00058 268 MobiDBLite consensus disorder prediction 72 99 - -
Vium5514g00058 268 SUPERFAMILY Leucine zipper domain 89 136 IPR046347 GO:0003700|GO:0006355
Vium5514g00058 268 Pfam Basic region leucine zipper 87 142 IPR004827 GO:0003700|GO:0006355
Vium5514g00058 268 MobiDBLite consensus disorder prediction 81 99 - -
Vium5514g00058 268 MobiDBLite consensus disorder prediction 247 268 - -
Vium5514g00058 268 Gene3D - 76 153 - -
Vium5514g00058 268 CDD bZIP 91 144 - -
Vium5514g00058 268 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700|GO:0006355
Vium5514g00058 268 SMART brlzneu 85 152 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5514g00058 Vium-Chr5514 322238 324628 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5514g00058 1 267 bZIP Transcription Factor Family AT2G16770 64.074 7.50e-114 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vium5514g00058 bZIP_2 7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5514g00058 K25785 - gmx:780549 455.292