Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5514g00040 ATGGGCAAGCCAGTTTTGAAATCGAGTCTTCCCCAGTTAGCTTTCTCCGTCCTTTTCTTGTTCATTTTCTTTTCCTCTGTTTGCTCCGATGAAGCTTCCAAAACCTTCATCTTCCGTGTCGACTCGCAGTCCAAGCCATCGGTGTTTCCCACTCACTACCACTGGTATACCTCCGAGTTCACCCAACAAACTCACATCCTCCACGTATACAACACCGTTTTCCACGGCTTCTCCGCCTTTCTCACGCCCCAACAGGTAGCCTCCATAAGCAACCACCCTTCCGTCCTCGCTGTCTTCGAAGACCGTCGCCGCCAGCTCCACACCACACGCTCCCCGCAGTTCCTCGGCCTCCGCAACCAGCGAGGCCTCTGGTCCGAATCCGACTATGGCTCTGATGTCATCATCGGAGTCTTTGATACCGGCGTCTGGCCTGAGCACCGCAGCTTTTCTGATTTGAACCTCGGCCCAATTCCCCGTCGCTGGAAAGGCGCGTGCGAAACCGGCGCCAGGTTCTCTCCCAAAAACTGCAACCGTAAGCTCATCGGTGCCAGATTCTTCTCCAAGGGTCACGAAGCTGGCGCGGCTTCCGGTCCTCTCAATCCGATCAACGACACCGTTGAATTTCGTTCCCCTCGCGACGCGGATGGCCATGGCACGCACACCGCTTCCACCGCTGCGGGCCGCTACGCCTTCCAAGCTAACATGTCCGGGTACGCTTCGGGAATCGCGAAGGGAGTGGCCCCGAAAGCGCGATTGGCGGTCTACAAAGTTTGCTGGAAAAACTCTGGCTGCTTCGATTCTGACATCCTCGCTGCATTCGACATCGCTGTCAGCGACGGCGTCGATGTCATTTCGATATCCATTGGCGGTGGTGACGGTATTGCCTCCCCTTATTACCTCGATCCTATCGCAATTGGGTCCTACGGTGCGGTTTCTAGAGGAGTGTTCGTGTCTTCTTCCGCCGGCAACGATGGGCCAAGCGGAATGACAGTGACCAACCTCGCTCCGTGGTTAACAACAGTGGGAGCGGGCACCATTGATCGTGACTTCCCGGCACAGGTGTTTTTAGGCGACGGGAGGAAGCTCTCGGGCGTGTCGCTCTACGCCGGAGCGGCGTTGAGTGGGAAAATGTATCAACTGGTTTACCCTGGGAAATCAGGGATTCTTGGGGATTCCCTCTGCATGGAGAATTCCTTGGATCCGAACCTGGTGAAGGGTAAGATAGTAGTATGCGACAGAGGAAGTAGCCCGAGGGTTGCGAAAGGGTTGGTGGTGAAGAAAGCCGGCGGCGTGGGAATGATTCTGGCGAACGGAATCTCCAACGGCGAAGGACTGGTGGGAGATGCTCATCTTCTTCCTGCATGTGCTGTTGGCGCCAACGAAGGAGATGCAATCAAGAAATACATCTCAACTTCCGCAAACCCAACGGCCACGCTTGATTTCAAAGGCACCATTCTTGGAATCAAACCGGCACCGGTCATTGCTTCTTTCTCGGCGAGAGGACCCAACGGTTTGAACCCTCAACTACTTAAACCCGATTTGATTGCTCCCGGTGTCAACATCATAGCGGCATGGACCGACGCTGTCGGCCCGACCGGTTTGGATTCGGATACGAGGAGAACGGAGTTCAACATCTTGTCTGGCACTTCCATGGCTTGCCCTCACGTGAGTGGCGCAGCAGCTTTGCTCAAATCCGCGCACCCTGATTGGAGCCCCGCCGCCATTAGGTCCGCCATGATGACCACCGCCACCGTCTTCGATAACCGCAACCGGATCATGACCGACGAAGCCACCGGGAACAGTTCCACTCCTTATGATTTCGGCGCTGGTCATCTTAACCTTGGACGAGCCTTGGATCCTGGGTTGGTCTATGACATCACCAACAATGATTATGTTAACTTCCTTTGTGGTATTGGTTACGGACCCAAGGTTATTCAGGTGATTACTCGCACACCGGCGAGTTGTCCGGTGAGAAAGCCGTCACCGGAGAATCTGAACTACCCTTCCTTTGTTGCCATGTTTCCGGTTTCGTCCAAGGGAGTGGCGTCCAAGACGTTCATTCGGACCGTGACCAACGTGGGGTCCGCGAACGCCGTTTATCGCGTGAGCGTGGAGGCCCCGGCGAGTGGTGTGACCGTGACGGTGAAGCCATCGCGGCTGGTGTTCTCGGAGGCGGTGAAGAAGCGGAGCTATGTGGTGACAGTGGCAGGGGATACCCGGAATCTAAAGATGGGTCAATCTGGGGCTGTTTTCGGGTCGCTGACGTGGACGGATGGGAAGCACGTGGTTCGGAGCCCCATTGTCGTTACTCAAATAGATCCGTTATAA 2328 0.5558 MGKPVLKSSLPQLAFSVLFLFIFFSSVCSDEASKTFIFRVDSQSKPSVFPTHYHWYTSEFTQQTHILHVYNTVFHGFSAFLTPQQVASISNHPSVLAVFEDRRRQLHTTRSPQFLGLRNQRGLWSESDYGSDVIIGVFDTGVWPEHRSFSDLNLGPIPRRWKGACETGARFSPKNCNRKLIGARFFSKGHEAGAASGPLNPINDTVEFRSPRDADGHGTHTASTAAGRYAFQANMSGYASGIAKGVAPKARLAVYKVCWKNSGCFDSDILAAFDIAVSDGVDVISISIGGGDGIASPYYLDPIAIGSYGAVSRGVFVSSSAGNDGPSGMTVTNLAPWLTTVGAGTIDRDFPAQVFLGDGRKLSGVSLYAGAALSGKMYQLVYPGKSGILGDSLCMENSLDPNLVKGKIVVCDRGSSPRVAKGLVVKKAGGVGMILANGISNGEGLVGDAHLLPACAVGANEGDAIKKYISTSANPTATLDFKGTILGIKPAPVIASFSARGPNGLNPQLLKPDLIAPGVNIIAAWTDAVGPTGLDSDTRRTEFNILSGTSMACPHVSGAAALLKSAHPDWSPAAIRSAMMTTATVFDNRNRIMTDEATGNSSTPYDFGAGHLNLGRALDPGLVYDITNNDYVNFLCGIGYGPKVIQVITRTPASCPVRKPSPENLNYPSFVAMFPVSSKGVASKTFIRTVTNVGSANAVYRVSVEAPASGVTVTVKPSRLVFSEAVKKRSYVVTVAGDTRNLKMGQSGAVFGSLTWTDGKHVVRSPIVVTQIDPL 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5514g00040 775 SUPERFAMILY Protease propeptides/inhibitors 36 103 - -
Vium5514g00040 775 MobiDBLite consensus disorder prediction 196 221 - -
Vium5514g00040 775 CDD Peptidases_S8_3 105 584 IPR034197 -
Vium5514g00040 775 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Vium5514g00040 775 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Vium5514g00040 775 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
Vium5514g00040 775 SUPERFAMILY PA domain 387 466 IPR046450 -
Vium5514g00040 775 Pfam PA domain 379 465 IPR003137 -
Vium5514g00040 775 ProSiteProfiles Serine proteases, subtilase domain profile. 105 618 - -
Vium5514g00040 775 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 107 IPR037045 -
Vium5514g00040 775 FunFam subtilisin-like protease SBT1.5 347 486 - -
Vium5514g00040 775 Gene3D - 347 486 - -
Vium5514g00040 775 Gene3D - 635 772 - -
Vium5514g00040 775 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Vium5514g00040 775 Pfam Subtilase family 130 595 IPR000209 GO:0006508|GO:0008236
Vium5514g00040 775 CDD PA_subtilisin_like 356 479 - -
Vium5514g00040 775 Gene3D Peptidase S8/S53 domain 132 631 IPR036852 GO:0004252|GO:0006508
Vium5514g00040 775 SUPERFAMILY Subtilisin-like 106 622 IPR036852 GO:0004252|GO:0006508
Vium5514g00040 775 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 62 769 IPR045051 -
Vium5514g00040 775 FunFam Subtilisin-like protease SBT1.5 132 360 - -
Vium5514g00040 775 Pfam Fibronectin type-III domain 664 769 IPR041469 -
Vium5514g00040 775 Pfam Peptidase inhibitor I9 48 107 IPR010259 -
Vium5514g00040 775 FunFam Subtilisin-like protease SBT1.5 635 772 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5514g00040 Vium-Chr5514 208757 211422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5514g00040 17 775 Subtilisin-like Serine Gene Family AT4G34980 75.427 0.0 1211