Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5514g00025 ATGGCGGCTACTGTGTCTGCGTGGTCAAAGCCCGGCGCGTGGGCCATCGATTCCGAGGAACACGAGGCTGAACTCCTTCAACAGAACCCCACCAGCGACACTGTCAAACCTCTTGCCGACTTCCCTTCCCTCGCTGTCGCCGCCGCCACCAAGCCCAAGAAGAAGAAGGCCCAGACCTACTCCCTCGCGGAGTTCACTGCCAAGCCCGACACCGCCTTCGCCGACCAAGATCCCGTCGTCCTCCCCACCGGCCCACGCCAGCGCACCGCCGAGGAGCTCGACCGCACCCGTCTAGGTGGCGGCTTCCGCTCCTACGGTGACCGCCCTAACAGGAATTCCTCGGGGGACGACTCGTCGAATTCCCGTTGGGGTTCATCTAGGGTTTCTGACGAGCCCAGGAGAAACGGTTCCTTTGGGGCTAGGGATTCCAATCGCGAGCTTCCCCCTTCTCGCGCTGACGAGACTGATAATTGGGCAGCGGCAAAGAAACCTTCGGGAGGGTTTGAGAGGAGGGAGAGGGATAGAGGAGGGTTCTTCGATTCGCAGTCGCGCGCTGACGAATCGGAGAGCTGGGTTTCGAATAAGAGCTTTGTGCCGTCGGAGCGGCGATTCGCCTCCAACGGTGGAGGGTTTGAGAGAGAGAGGAAGGTTATTGGGTTTGGCTCCAGCGGCGGCGCTGATTCAAATGACTGGAACAAGAAGAAGGGCGAATCCAACGTTGGTAGCGAGAGTGTTGGTGCTGGTGGAGGGAGACCAAGGCTTGTTCTGCAACCTCGGTCTCTGTCGGTGTCCAATGAAGGGGGGGATGGGAATGTGGGGAAACCTAAAGGGGTTAATCCATTCGGAGAAGCGAGGCCAAGGGAGCAGGTTTTGGCGGAGAAAGGGCAAGATTGGAAAAAGATTGATGAACAGCTTGAGAGCATGAAGATTAAGGAGACAGGTGGAGGTGAAGCCTTTGTGAAGAGGGGTTTTGGGTCTTCCAATGGAGGAGGACGAGCTGCTTTGCCTGAAAGTCGCACTGAGAGGAGTTGGAGGAAGCCCATTTCTGATGATGAAAGTCCTACAAGTGCTGAAAAAGTTGAAGATAAAGCCGTAGAAGAAAATTGA 1107 0.5673 MAATVSAWSKPGAWAIDSEEHEAELLQQNPTSDTVKPLADFPSLAVAAATKPKKKKAQTYSLAEFTAKPDTAFADQDPVVLPTGPRQRTAEELDRTRLGGGFRSYGDRPNRNSSGDDSSNSRWGSSRVSDEPRRNGSFGARDSNRELPPSRADETDNWAAAKKPSGGFERRERDRGGFFDSQSRADESESWVSNKSFVPSERRFASNGGGFERERKVIGFGSSGGADSNDWNKKKGESNVGSESVGAGGGRPRLVLQPRSLSVSNEGGDGNVGKPKGVNPFGEARPREQVLAEKGQDWKKIDEQLESMKIKETGGGEAFVKRGFGSSNGGGRAALPESRTERSWRKPISDDESPTSAEKVEDKAVEEN 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5514g00025 368 MobiDBLite consensus disorder prediction 165 182 - -
Vium5514g00025 368 MobiDBLite consensus disorder prediction 66 286 - -
Vium5514g00025 368 MobiDBLite consensus disorder prediction 107 132 - -
Vium5514g00025 368 MobiDBLite consensus disorder prediction 183 201 - -
Vium5514g00025 368 Pfam Plant specific eukaryotic initiation factor 4B 7 310 IPR010433 GO:0003743
Vium5514g00025 368 MobiDBLite consensus disorder prediction 312 368 - -
Vium5514g00025 368 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 356 IPR010433 GO:0003743
Vium5514g00025 368 MobiDBLite consensus disorder prediction 338 368 - -
Vium5514g00025 368 MobiDBLite consensus disorder prediction 134 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5514g00025 Vium-Chr5514 89426 91637 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5514g00025 1 349 Eukaryotic Initiation Factors Gene Family AT4G38710 50.500 1.62e-62 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5514g00025 - - pvu:PHAVU_011G033300g 641.343