Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium5476g00004 ATGTCTTGTGATTTCAGGCTGTACAAGGGAATAGTGCCTCTGTGGGGACGACAAATTCCATACACAATGATGAAGTTTGCTTCATTTGAGACCATAGTGGAGCTGATCTATAAGCATGCCATTCCTACTCCAAAGAATGAGTGCACCAAAAGCCTGCAACTCGGTGTCAGTTTTGCTGGTGGATATGTTGCTGGTGTGCTTTGTGCAATCGTGTCTCATCCTGCTGATAATCTTGTCTCTTTCCTGAACAATGCTAAAGGAGCAACAGTTGGTGATGCGGTGAGTAAGCTTGGTTTGTGGGGTCTCTTCACCCGTGGTCTTCCCCTCCGTATTGTGATGATTGGAACTCTTACTGGTGCCCAATGGGGAATATATGATGCTTTCAAAGTCTTTGTTGGGCTGCCAACAACGGGTGGTCCTGCTCCTGCCGCTGCTCCAGCTCCAGCTCCTGGTTCTGACCTAGCAAAGGCGTAA 474 0.481 MSCDFRLYKGIVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNECTKSLQLGVSFAGGYVAGVLCAIVSHPADNLVSFLNNAKGATVGDAVSKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAAPAPAPGSDLAKA 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium5476g00004 157 FunFam Phosphate carrier protein, mitochondrial 3 133 - -
Vium5476g00004 157 Gene3D Mitochondrial carrier domain 5 149 IPR023395 -
Vium5476g00004 157 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 6 142 IPR044677 GO:0005315|GO:1990547
Vium5476g00004 157 SUPERFAMILY Mitochondrial carrier 6 127 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium5476g00004 Vium-Chr5476 15365 22136 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium5476g00004 7 157 Chloroplast and Mitochondria Gene Families AT5G14040 84.106 9.33e-87 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium5476g00004 K15102 - vum:124840878 298.516